CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033898_P002	Maize	nucleus	90.39	92.19
TraesCS4A01G252100.2	Wheat	nucleus	84.68	84.57
TraesCS4B01G063100.1	Wheat	nucleus, plastid	81.3	84.48
TraesCS4D01G062100.1	Wheat	nucleus	84.55	81.07
Os03t0732100-01	Rice	nucleus	82.47	80.38
HORVU4Hr1G010430.6	Barley	nucleus	83.25	79.23
GSMUA_Achr5P08840_001	Banana	nucleus	24.55	59.62
Bra032147.1-P	Field mustard	nucleus	24.16	58.12
Bra011713.1-P	Field mustard	nucleus	25.45	57.48
Bra010577.1-P	Field mustard	nucleus	24.16	56.53
PGSC0003DMT400056612	Potato	nucleus	21.04	54.92
VIT_18s0001g11800.t01	Wine grape	nucleus	24.68	54.44
KRH69971	Soybean	nucleus	43.25	49.41
KRH28575	Soybean	nucleus	44.81	48.94
KRH76894	Soybean	nucleus	45.06	48.87
Solyc02g089940.2.1	Tomato	nucleus	45.06	47.8
KRH08329	Soybean	nucleus	47.53	47.1
PGSC0003DMT400026172	Potato	nucleus	45.06	47.02
CDX76849	Canola	nucleus	36.62	46.92
CDY46061	Canola	nucleus	36.88	46.71
Bra039212.1-P	Field mustard	nucleus	36.75	46.55
Solyc02g065490.2.1	Tomato	nucleus	37.53	46.31
CDX69252	Canola	nucleus	39.61	45.73
CDX75604	Canola	nucleus	39.61	45.59
CDY39669	Canola	nucleus	37.92	45.27
CDY62523	Canola	nucleus	37.92	45.06
VIT_04s0023g01020.t01	Wine grape	nucleus	48.96	44.56
CDY22463	Canola	nucleus	38.18	43.88
CDY24765	Canola	nucleus	37.79	43.63
AT2G23760.4	Thale cress	nucleus	37.53	42.56
AT4G36870.2	Thale cress	nucleus	40.0	41.68
Solyc04g079830.2.1	Tomato	nucleus	35.45	39.45
EER89055	Sorghum	nucleus	23.51	34.54
KXG37846	Sorghum	nucleus	14.94	32.3
KXG40303	Sorghum	nucleus	24.42	30.03
EES03882	Sorghum	nucleus	22.6	29.34
KXG24130	Sorghum	nucleus	25.06	29.33
EER92806	Sorghum	nucleus	22.47	29.32
EES18336	Sorghum	nucleus	21.69	29.3
EER92018	Sorghum	nucleus	23.9	29.02
EER91079	Sorghum	nucleus	24.42	28.97
EES09309	Sorghum	nucleus	23.64	26.38
KXG20197	Sorghum	nucleus	13.51	21.05
EES04785	Sorghum	nucleus	13.9	18.97

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EntrezGene:8059948	UniProt:C5WLY0	EnsemblPlants:EER93512	ProteinID:EER93512
ProteinID:EER93512.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom
InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF136	SMART:SM00389	SMART:SM00574	EnsemblPlantsGene:SORBI_3001G102300	SUPFAM:SSF46689	unigene:Sbi.16177
UniParc:UPI0001A82763	RefSeq:XP_002466514.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:7815194..7826656

Molecular Weight (calculated)

80779.1 Da

IEP (calculated)

7.047

GRAVY (calculated)

-0.525

Length

770 amino acids

Sequence
(BLAST)

001: MGIAAPPYQQ TITTYVSQPT KSSAAISASA RAATATSMSH SQGFHHQASS GVYGYSSDGF DRPDSSHHQQ DHHQQQHEHV AQQSRRDKLR VQAGFDPAAA
101: AGHGLLPIDG GDDHGGPGSI YEQAAAAAGA SNMLSEMFNF PAPPSGPSAT ELLASQMSAN YRFGLRQQQQ AGPGGVAGLS GGDGGWFGTG AAGRAGLVLG
201: GASMGSLGET SSPKQQQAGS MAGLATDPAA AMQLFLMNPQ QQQQQSRSSP TSPPPSDVQH HEAFQAFGAA AGAAFGGAGT GVVEGQGLSL SLSPSLQQLE
301: MAKQAEELRV RDGVLYFNRQ QQQQGPTSVQ QQQLPMALHG QVGALGQQLH VGYGPAGVAG VLRNSKYTRA AQELLEEFCS VGRGQIKGGA RGGRGASASN
401: PNASNKQGGA SSSGAAQSPS SASKEPPQLS PADRFEHQRK KAKLISMLDE VDRRYNHYCD QMQMVVNFFD SVMGFGAATP YTALAQKAMS RHFRCLKDAI
501: AAQLRTTCEL LGEKDAGTSS GLTKGETPRL RAIDQSLRQQ RAFHHMGMME QEAWRPQRGL PERSVNILRS WLFEHFLHPY PSDADKHLLA RQTGLSRNQV
601: SNWFINARVR LWKPMIEEMY QQECRELEGS SAGGGGGPES GNDPSGADDS HSPTTTGAAQ LPQQQQQHGT MPGVMMPHKP DPSAAGPSAA DAAFVGIDPV
701: ELLGGDAHVG GGADDLYGRF EPGVRVRYGP AAAGAAAGDV SLTLGLQHAG AGNAGPDSTG RFSLRDYSGC

Best Arabidopsis Sequence Match ( AT2G23760.2 )
(BLAST)

001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF

Arabidopsis Description

BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.