Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056612 | Potato | nucleus | 31.09 | 65.76 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 24.68 | 51.85 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 26.12 | 51.42 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 24.2 | 49.84 |
| Solyc02g089940.2.1 | Tomato | nucleus | 57.69 | 49.59 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 31.25 | 48.99 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 46.47 | 42.4 |
| Solyc04g079830.2.1 | Tomato | nucleus | 44.55 | 40.17 |
| Solyc10g086640.1.1 | Tomato | nucleus | 16.51 | 39.92 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 44.71 | 37.65 |
| EER93512 | Sorghum | nucleus, plastid | 46.31 | 37.53 |
| Zm00001d033898_P002 | Maize | nucleus | 45.35 | 37.48 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 44.87 | 36.32 |
| Os03t0732100-01 | Rice | nucleus | 45.83 | 36.2 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 45.03 | 34.99 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 45.19 | 34.86 |
| Solyc08g081400.2.1 | Tomato | nucleus | 31.25 | 30.28 |
| Solyc04g080780.2.1 | Tomato | nucleus | 19.39 | 30.25 |
| Solyc09g011380.2.1 | Tomato | nucleus | 23.88 | 29.56 |
| Solyc01g109980.2.1 | Tomato | nucleus | 26.28 | 25.43 |
| Solyc11g069890.1.1 | Tomato | golgi | 23.56 | 25.34 |
| Solyc11g068950.1.1 | Tomato | nucleus | 25.16 | 23.75 |
| Solyc06g074120.2.1 | Tomato | nucleus | 26.44 | 23.61 |
| Solyc01g007070.2.1 | Tomato | nucleus | 25.96 | 23.14 |
| Solyc04g080790.2.1 | Tomato | nucleus | 24.2 | 22.84 |
| Solyc08g065420.2.1 | Tomato | nucleus | 15.71 | 17.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:K4B6Y1 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc02g065490.2 | EnsemblPlants:Solyc02g065490.2.1 | UniParc:UPI0002768BF1 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:36642485..36650406
Molecular Weight (calculated)
69749.5 Da
IEP (calculated)
6.966
GRAVY (calculated)
-0.730
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQEYHHQGL ASNEFERPQD QHHHQQQHIG QQIQQEKLRV EQGFEPRGGE SSGIQVYETD GMLSEMFNFQ TTSTAAMTAT ELLQEQLSHS NQQPHHQPWF
101: GNRQEIVVGG SLQVPFGDNT KDDVNAKVLS NRDSVTAYYQ RQHNQVPSIS TTESMQLFLM NPQPNSPSQL STPSALHQGF TSPVGGHFSQ FMCGGASTSS
201: NPIGGVNVLD QGQGLSLSLS STLQHLEASK VEDLRMSSGG EMLFFNQENQ NHHNISFGSS LGLVNVLRNS KYVKATQELL EEFCCVGKGQ LFKKINKVSR
301: NITSPTINPS GSNNNNSSSS KDIIPPNLST ADRLDHQRRK VDKRYNHYCE QMQMVVNSFD LVMGFGAAVP YTSLAHKAMS RHFKCLKDGV GAQLKKTCEA
401: LGEKDVSNTT SSGLTKGETP RLKLLEQNLR QQRAFQQMGI VMEQEAWRPQ RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSK NQVANWFINA
501: RVRLWKPMVE EMYQREANED DDMNSRNTQR PTPDITTTNS KITETKSAAA TENDPSMNTH YSSSMQTQLN NSPTIQHESH RSGAEYDGTT DIGSKIMTFG
601: TTTPADVSLT LGLHHAGNLP HFYN
101: GNRQEIVVGG SLQVPFGDNT KDDVNAKVLS NRDSVTAYYQ RQHNQVPSIS TTESMQLFLM NPQPNSPSQL STPSALHQGF TSPVGGHFSQ FMCGGASTSS
201: NPIGGVNVLD QGQGLSLSLS STLQHLEASK VEDLRMSSGG EMLFFNQENQ NHHNISFGSS LGLVNVLRNS KYVKATQELL EEFCCVGKGQ LFKKINKVSR
301: NITSPTINPS GSNNNNSSSS KDIIPPNLST ADRLDHQRRK VDKRYNHYCE QMQMVVNSFD LVMGFGAAVP YTSLAHKAMS RHFKCLKDGV GAQLKKTCEA
401: LGEKDVSNTT SSGLTKGETP RLKLLEQNLR QQRAFQQMGI VMEQEAWRPQ RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSK NQVANWFINA
501: RVRLWKPMVE EMYQREANED DDMNSRNTQR PTPDITTTNS KITETKSAAA TENDPSMNTH YSSSMQTQLN NSPTIQHESH RSGAEYDGTT DIGSKIMTFG
601: TTTPADVSLT LGLHHAGNLP HFYN
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.