Factsheet for GSMUA_Achr7P27440_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07450_001	Banana	nucleus	33.19	74.92
GSMUA_Achr4P14670_001	Banana	nucleus	31.87	73.4
GSMUA_Achr5P08840_001	Banana	nucleus	32.46	70.03
GSMUA_Achr1P26900_001	Banana	nucleus	37.43	64.32
Bra032147.1-P	Field mustard	nucleus	26.75	57.19
Bra011713.1-P	Field mustard	nucleus	27.92	56.01
Bra010577.1-P	Field mustard	nucleus	26.02	54.1
VIT_18s0001g11800.t01	Wine grape	nucleus	27.19	53.3
GSMUA_Achr5P03140_001	Banana	nucleus	5.85	51.95
PGSC0003DMT400056612	Potato	nucleus	21.78	50.51
KRH69971	Soybean	nucleus	48.98	49.7
KRH28575	Soybean	nucleus	50.58	49.08
KRH76894	Soybean	nucleus	50.58	48.73
KRH08329	Soybean	nucleus	53.22	46.85
Solyc02g065490.2.1	Tomato	nucleus	42.4	46.47
Solyc02g089940.2.1	Tomato	nucleus	49.27	46.42
PGSC0003DMT400026172	Potato	nucleus	49.85	46.21
CDX76849	Canola	nucleus	39.77	45.26
VIT_04s0023g01020.t01	Wine grape	nucleus	55.85	45.15
CDY46061	Canola	nucleus	39.77	44.74
Bra039212.1-P	Field mustard	nucleus	39.62	44.57
CDX75604	Canola	nucleus	43.27	44.25
CDX69252	Canola	nucleus	43.13	44.23
CDY39669	Canola	nucleus	41.37	43.88
CDY62523	Canola	nucleus	41.52	43.83
GSMUA_Achr1P03680_001	Banana	nucleus	18.42	42.57
CDY24765	Canola	nucleus	40.79	41.83
CDY22463	Canola	nucleus	40.94	41.79
AT4G36870.2	Thale cress	nucleus	44.59	41.27
AT2G23760.4	Thale cress	nucleus	40.64	40.94
Solyc04g079830.2.1	Tomato	nucleus	40.94	40.46
GSMUA_Achr10P...	Banana	nucleus	5.85	39.22
GSMUA_Achr11P...	Banana	plastid	14.91	38.78
GSMUA_Achr4P04480_001	Banana	nucleus	23.25	37.77
GSMUA_Achr1P23300_001	Banana	extracellular	22.81	36.11
GSMUA_Achr10P...	Banana	nucleus	21.78	35.65
GSMUA_Achr2P06410_001	Banana	nucleus	7.46	35.17
GSMUA_Achr4P12180_001	Banana	nucleus	26.32	34.42
GSMUA_Achr1P06400_001	Banana	nucleus	25.73	34.11
GSMUA_Achr6P07130_001	Banana	nucleus	24.27	33.81
GSMUA_Achr10P...	Banana	plastid	4.68	32.99
GSMUA_Achr3P29230_001	Banana	nucleus	21.34	32.3
GSMUA_Achr2P04310_001	Banana	nucleus	26.17	32.08
GSMUA_Achr7P14960_001	Banana	nucleus	20.32	31.59
GSMUA_Achr5P03130_001	Banana	cytosol	15.35	31.44
GSMUA_Achr4P13590_001	Banana	nucleus	25.73	30.93
GSMUA_Achr9P21580_001	Banana	nucleus	24.12	30.22
GSMUA_Achr9P18740_001	Banana	nucleus	24.71	29.34
GSMUA_Achr4P06630_001	Banana	nucleus	23.39	28.27
GSMUA_Achr6P18180_001	Banana	nucleus	25.58	27.6
GSMUA_Achr5P07020_001	Banana	nucleus	19.88	25.9
GSMUA_Achr2P06420_001	Banana	nucleus	13.6	25.2
GSMUA_Achr10P...	Banana	nucleus	24.42	22.15
GSMUA_Achr11P...	Banana	plastid	13.16	22.06
GSMUA_Achr2P19430_001	Banana	nucleus	15.2	19.22
GSMUA_AchrUn_...	Banana	nucleus	16.23	18.72
GSMUA_Achr4P02680_001	Banana	nucleus	14.18	16.75

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G27440_001	EnsemblPlants:GSMUA_Achr7P27440_001
EnsemblPlants:GSMUA_Achr7T27440_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0TL80
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF136
SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000296D0E5	SEG:seg	:

Description

Putative homeobox domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G27440_001]

Coordinates

chr7:-:28449287..28453162

Molecular Weight (calculated)

73624.3 Da

IEP (calculated)

8.297

GRAVY (calculated)

-0.571

Length

684 amino acids

Sequence
(BLAST)

001: MGIATQPSQL TFAYLSPPSK TLGGTQAGPS SPASMSQGFH QGIFSFPEGF DRSANREQQQ NHHVAQQSRR DKLRVQGFDA AGHPLVPIDE HGEEASIYGS
101: TAVGAGNMLS DMFSFPAAGL TAVDLHANQI SGGFHLPPRP AATAGGFTGD WYGPTRQGNQ QQHSVTALNA DSAAAMQLFL MNPLLQPPPP QQQRPNSPSP
201: PPPAHQQAFQ SFGDAPFGGR VAEGQGLSLS LSSSLQQLEM AKADELRFRE GVLYFNNQQQ QHSTLHLQGQ VPGHGQQSHM GYGSMGLVNV LRNSKYAKPG
301: QELLEEFCSV GKGQLKGSKA GRHRGGSSNP NCNPTGGGGS GGASSSAAAS SSSKDVPPLA PADRFEHQRK KAKLISMLDE ACIKNACGLS GTSICHSCVD
401: RRYNHYCDQM QMVVNSFDSV MGFGAATPYT SLAQKAMSRH FRCLKDAIAA QLKQTCELLG EKESATGSGI TKGDTPRLRL LDQTLRQQRA FNQMGMMEQE
501: AWRPQRGLPD RSVHILRGWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN WFINARVRLW KPMVEDMYLQ ESKEEEQGQR TETNAPSESD ASPSTSSVSR
601: RHHRLAAASE NPPPGLVAAH QPSGGDDDSV LVGVNAFAAL NAAHVGDMYR HGTAGDVSLT LGLRHAGGST SEKNRFSLRN FGGC

Best Arabidopsis Sequence Match ( AT2G23760.2 )
(BLAST)

001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF

Arabidopsis Description

BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.