Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032147.1-P | Field mustard | nucleus | 49.46 | 99.69 |
| CDY62523 | Canola | nucleus | 98.6 | 98.15 |
| CDY46061 | Canola | nucleus | 85.74 | 90.95 |
| CDX76849 | Canola | nucleus | 84.5 | 90.68 |
| AT2G23760.4 | Thale cress | nucleus | 86.36 | 82.03 |
| CDX75604 | Canola | nucleus | 65.27 | 62.93 |
| CDX69252 | Canola | nucleus | 64.81 | 62.67 |
| CDY22463 | Canola | nucleus | 61.55 | 59.25 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 28.84 | 58.68 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 26.67 | 57.91 |
| CDY24765 | Canola | nucleus | 59.84 | 57.87 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 26.98 | 57.43 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 33.95 | 55.03 |
| CDX83753 | Canola | nucleus | 14.57 | 49.47 |
| KRH76894 | Soybean | nucleus | 52.25 | 47.46 |
| KRH28575 | Soybean | nucleus | 51.78 | 47.38 |
| KRH69971 | Soybean | nucleus | 48.37 | 46.29 |
| Solyc02g089940.2.1 | Tomato | nucleus | 50.85 | 45.18 |
| PGSC0003DMT400026172 | Potato | nucleus | 51.47 | 44.99 |
| KRH08329 | Soybean | nucleus | 53.02 | 44.02 |
| VIT_04s0023g01020.t01 | Wine grape | nucleus | 55.5 | 42.32 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 43.88 | 41.37 |
| CDY45383 | Canola | nucleus | 16.59 | 40.68 |
| CDY21826 | Canola | extracellular, plastid | 5.89 | 39.58 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 43.88 | 38.19 |
| Zm00001d033898_P002 | Maize | nucleus | 44.65 | 38.15 |
| EER93512 | Sorghum | nucleus, plastid | 45.27 | 37.92 |
| CDX73171 | Canola | nucleus | 16.74 | 37.37 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 44.34 | 37.09 |
| CDY47523 | Canola | nucleus | 16.59 | 37.02 |
| Os03t0732100-01 | Rice | nucleus | 44.96 | 36.71 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 44.5 | 35.74 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 44.34 | 35.35 |
| CDY46209 | Canola | nucleus | 20.47 | 34.92 |
| CDX89711 | Canola | nucleus | 24.19 | 34.29 |
| CDY29411 | Canola | nucleus | 20.62 | 34.19 |
| CDY02261 | Canola | nucleus | 23.57 | 33.85 |
| CDX75307 | Canola | nucleus | 11.47 | 33.33 |
| CDY52073 | Canola | nucleus | 23.41 | 32.06 |
| CDY39031 | Canola | nucleus | 23.41 | 31.59 |
| CDX68129 | Canola | nucleus | 22.48 | 30.66 |
| CDY47524 | Canola | nucleus | 24.34 | 30.43 |
| CDX73170 | Canola | nucleus | 24.19 | 30.35 |
| CDY44476 | Canola | nucleus | 26.67 | 30.28 |
| CDX85896 | Canola | nucleus | 23.1 | 29.62 |
| CDX96653 | Canola | nucleus | 22.02 | 28.06 |
| CDY63699 | Canola | nucleus | 17.98 | 27.75 |
| CDY39359 | Canola | nucleus | 22.02 | 27.36 |
| CDY30566 | Canola | nucleus | 18.91 | 27.23 |
| CDX77099 | Canola | nucleus | 18.91 | 27.17 |
| CDX71279 | Canola | nucleus | 16.12 | 26.8 |
| CDY10473 | Canola | nucleus | 23.72 | 26.61 |
| CDY40327 | Canola | nucleus | 23.72 | 26.47 |
| CDY40420 | Canola | nucleus | 25.74 | 26.27 |
| CDY32069 | Canola | nucleus | 25.74 | 26.1 |
| CDY69132 | Canola | nucleus | 22.95 | 25.78 |
| CDY48107 | Canola | nucleus | 22.64 | 25.39 |
| CDX84171 | Canola | nucleus | 22.64 | 24.83 |
| CDX84585 | Canola | nucleus | 25.58 | 24.59 |
| CDY55113 | Canola | nucleus | 19.84 | 24.47 |
| CDX79646 | Canola | nucleus | 25.89 | 24.17 |
| CDX75085 | Canola | nucleus | 23.1 | 23.73 |
| CDX80798 | Canola | nucleus | 19.53 | 23.68 |
| CDY45321 | Canola | nucleus, plastid | 23.88 | 22.48 |
| CDY13511 | Canola | nucleus | 15.04 | 22.2 |
| CDX68927 | Canola | nucleus | 15.66 | 21.91 |
| CDX75313 | Canola | nucleus | 15.81 | 21.89 |
| CDX72383 | Canola | nucleus | 14.57 | 20.8 |
| CDX68925 | Canola | cytosol | 4.19 | 14.92 |
| CDX68906 | Canola | nucleus | 4.96 | 12.36 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078HQR5 | UniProt:A0A078HQR5 | EnsemblPlants:CDY39669 | ProteinID:CDY39669 |
| ProteinID:CDY39669.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00068249001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain |
| InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 |
| PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 | UniParc:UPI0004EEE7CD |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g13860DBnaA04g13860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQR5]
Coordinates
chrLK032454:-:82236..87540
Molecular Weight (calculated)
71248.7 Da
IEP (calculated)
7.072
GRAVY (calculated)
-0.754
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLATTTVPH HRHHHKTLDN SLDSMSQDYH HHQGIFSFSS GFHRPSSSHQ EEVEESAVSG AQIPVYETAG MLSEMFTYPG GGNGGSGEIL DHSTKQLLEQ
101: QNRHNNNNST LHMLLPNHHH QGYGYPNEQQ FTWPSSSDHH QSQGDMIGTV HVEGGKGLSL SLSSSLEAAA AAAKAEEYRS IYCAAVDGTS SSSNASVHHH
201: QFNQLKTLLL DNSSSHQHQV MGHFGSSSSS PMAASSSIGG IYTLRNSKYT KPAQELLEEF CSVGRGHHFK KNKLSRNNSN PNTSGCGGGG GGGGSSSTAG
301: AANDSPPLSP ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKESAGAAS
401: SGLTKGETPR LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM
501: YQQEAKEREE EELGENKKED YQHQRRHQQT NNKDTKPNES NFTLVQTITA QTPTTTMMTS TPHENDPSSL PPSTSVANAP SLGVSGAFTV STCQQDVSDF
601: HVEDGVIRFG TKQAGDVSLT LGLRHTGNMP DNKNPSFSVR DFGDF
101: QNRHNNNNST LHMLLPNHHH QGYGYPNEQQ FTWPSSSDHH QSQGDMIGTV HVEGGKGLSL SLSSSLEAAA AAAKAEEYRS IYCAAVDGTS SSSNASVHHH
201: QFNQLKTLLL DNSSSHQHQV MGHFGSSSSS PMAASSSIGG IYTLRNSKYT KPAQELLEEF CSVGRGHHFK KNKLSRNNSN PNTSGCGGGG GGGGSSSTAG
301: AANDSPPLSP ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKESAGAAS
401: SGLTKGETPR LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM
501: YQQEAKEREE EELGENKKED YQHQRRHQQT NNKDTKPNES NFTLVQTITA QTPTTTMMTS TPHENDPSSL PPSTSVANAP SLGVSGAFTV STCQQDVSDF
601: HVEDGVIRFG TKQAGDVSLT LGLRHTGNMP DNKNPSFSVR DFGDF
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.