CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008197.1-P	Field mustard	nucleus	97.28	99.57
CDY52073	Canola	nucleus	96.23	97.66
CDX83753	Canola	nucleus	31.38	78.95
CDX68129	Canola	nucleus	77.82	78.65
CDX73170	Canola	nucleus	83.47	77.63
CDY47524	Canola	nucleus	83.47	77.33
AT1G75410.2	Thale cress	nucleus	83.47	76.14
CDX85896	Canola	nucleus	79.29	75.35
CDY29411	Canola	nucleus	51.26	62.98
CDY63699	Canola	nucleus	51.88	59.33
CDY39359	Canola	nucleus	63.6	58.57
CDX96653	Canola	nucleus	60.46	57.11
CDY21826	Canola	extracellular, plastid	9.41	46.88
CDX73171	Canola	nucleus	24.48	40.48
CDY47523	Canola	nucleus	24.27	40.14
CDY02261	Canola	nucleus	37.66	40.09
CDX89711	Canola	nucleus	37.45	39.34
CDY46209	Canola	nucleus	30.54	38.62
CDX75307	Canola	nucleus	17.36	37.39
KRH51792	Soybean	nucleus	45.4	34.07
KRH05875	Soybean	nucleus	43.1	33.72
CDY45383	Canola	nucleus	18.41	33.46
KRH15136	Soybean	nucleus	44.14	33.18
KRH61114	Soybean	nucleus	44.77	33.13
Solyc04g080790.2.1	Tomato	nucleus	43.1	31.16
PGSC0003DMT400009610	Potato	nucleus	42.89	31.01
VIT_18s0001g13150.t01	Wine grape	nucleus	44.14	30.23
CDX71279	Canola	nucleus	24.48	30.15
CDY45321	Canola	nucleus, plastid	37.03	25.84
CDY40420	Canola	nucleus	33.68	25.47
CDY32069	Canola	nucleus	33.89	25.47
CDX76849	Canola	nucleus	32.01	25.46
CDX77099	Canola	nucleus	23.85	25.39
CDX84171	Canola	nucleus	31.17	25.34
CDY46061	Canola	nucleus	32.22	25.33
CDY30566	Canola	nucleus	23.64	25.22
CDX84585	Canola	nucleus	33.26	23.7
CDY44476	Canola	nucleus	28.03	23.59
CDX75085	Canola	nucleus	30.96	23.57
CDY39669	Canola	nucleus	31.59	23.41
CDY62523	Canola	nucleus	31.59	23.3
CDY40327	Canola	nucleus	28.03	23.18
CDY22463	Canola	nucleus	32.43	23.13
CDX79646	Canola	nucleus	33.26	23.01
CDY10473	Canola	nucleus	27.62	22.96
CDX69252	Canola	nucleus	32.01	22.94
CDY24765	Canola	nucleus	31.8	22.79
CDX75604	Canola	nucleus	31.59	22.57
CDY69132	Canola	nucleus	26.78	22.3
CDY48107	Canola	nucleus	26.57	22.09
CDX68927	Canola	nucleus	20.5	21.26
CDX75313	Canola	nucleus	20.71	21.24
CDY13511	Canola	nucleus	19.04	20.82
CDY55113	Canola	nucleus	22.38	20.46
CDX80798	Canola	nucleus	22.38	20.11
CDX72383	Canola	nucleus	18.62	19.69
CDX68925	Canola	cytosol	6.9	18.23
CDX68906	Canola	nucleus	4.39	8.11

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:A0A078HN93	UniProt:A0A078HN93	EnsemblPlants:CDY39031	ProteinID:CDY39031
ProteinID:CDY39031.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00067165001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071
PANTHER:PTHR11850	PANTHER:PTHR11850:SF65	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0004EF25F1
SEG:seg	:	:	:	:	:

Description

BnaA02g17200DBnaA02g17200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN93]

Coordinates

chrLK032439:-:22148..24634

Molecular Weight (calculated)

54272.2 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.831

Length

478 amino acids

Sequence
(BLAST)

001: MAVYYPTSTV GMQSLYQEPI YLNEQASSSS AASFSGAGAG ANCLEIPNSV PNEMVFIPPT SDTSLNGNVT VSSNDLSFHG GGLSLSLGNQ IQYHYQNLSN
101: QLSYNEENGK SHHHQHHHQV PSFGFYNNGF VSSVLRSRYL KPTQQLLDEV VSVKKTKNNE KGQDFTNGSK PNDTNNTVNN EELSPSERHE LQSKKHKLLT
201: MVDEVDKRYN QYYHQMEALA SSFEMVAGVG AAKPYTSVAL NRISRHFRNL RDAIKEQVQV IRGKLGEKET AEEQGERIPR LRYLDQRLRQ QRALHQQLGM
301: VRPTWRPQRG LPENSVSILR AWLFEHFLHP YPKESEKIML AKQTGLSKNQ VANWFINARV RLWKPMIEEM YKEEFGDSPE LLSNSNQDSS NNKKNRMNET
401: SQLKHEDTSS SSQQQNHGNN NIPYTSDAEE NLIFADPKPD SLMNYNGFGV VDYNGYIGLG NQQDGRFSNP HQLHDFVV

Best Arabidopsis Sequence Match ( AT1G75410.1 )
(BLAST)

001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV

Arabidopsis Description

BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.