Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011713.1-P | Field mustard | nucleus | 50.97 | 100.0 |
| CDX69252 | Canola | nucleus | 96.26 | 96.55 |
| CDY24765 | Canola | nucleus | 78.48 | 78.71 |
| CDY22463 | Canola | nucleus | 78.77 | 78.66 |
| AT4G36870.2 | Thale cress | nucleus | 83.11 | 75.24 |
| CDX76849 | Canola | nucleus | 61.73 | 68.72 |
| CDY46061 | Canola | nucleus | 61.73 | 67.93 |
| CDY39669 | Canola | nucleus | 62.93 | 65.27 |
| CDY62523 | Canola | nucleus | 62.93 | 64.97 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 29.3 | 61.83 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 26.91 | 60.61 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 26.91 | 59.41 |
| VIT_18s0001g11800.t01 | Wine grape | nucleus | 30.34 | 58.17 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 33.33 | 56.03 |
| CDX83753 | Canola | nucleus | 14.65 | 51.58 |
| Solyc04g079830.2.1 | Tomato | nucleus | 44.84 | 43.35 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 44.25 | 43.27 |
| CDY45383 | Canola | nucleus | 16.74 | 42.59 |
| CDY21826 | Canola | extracellular, plastid | 5.83 | 40.62 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 44.39 | 40.08 |
| EER93512 | Sorghum | nucleus, plastid | 45.59 | 39.61 |
| Zm00001d033898_P002 | Maize | nucleus | 44.69 | 39.6 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 44.84 | 38.91 |
| Os03t0732100-01 | Rice | nucleus | 44.54 | 37.72 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 44.84 | 37.36 |
| CDX73171 | Canola | nucleus | 15.99 | 37.02 |
| CDY47523 | Canola | nucleus | 15.84 | 36.68 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 44.1 | 36.46 |
| CDX89711 | Canola | nucleus | 24.36 | 35.82 |
| CDY02261 | Canola | nucleus | 23.77 | 35.41 |
| CDY46209 | Canola | nucleus | 19.88 | 35.19 |
| CDY29411 | Canola | nucleus | 20.03 | 34.45 |
| CDX75307 | Canola | nucleus | 11.21 | 33.78 |
| CDY52073 | Canola | nucleus | 22.57 | 32.06 |
| CDY44476 | Canola | nucleus | 27.2 | 32.04 |
| CDY39031 | Canola | nucleus | 22.57 | 31.59 |
| CDX68129 | Canola | nucleus | 21.97 | 31.08 |
| CDY47524 | Canola | nucleus | 23.62 | 30.62 |
| CDX73170 | Canola | nucleus | 23.47 | 30.54 |
| CDX85896 | Canola | nucleus | 22.27 | 29.62 |
| CDX96653 | Canola | nucleus | 21.38 | 28.26 |
| CDY63699 | Canola | nucleus | 17.64 | 28.23 |
| CDY39359 | Canola | nucleus | 21.52 | 27.75 |
| CDY40420 | Canola | nucleus | 26.16 | 27.69 |
| CDY32069 | Canola | nucleus | 26.16 | 27.52 |
| CDY30566 | Canola | nucleus | 18.09 | 27.01 |
| CDY40327 | Canola | nucleus | 23.32 | 26.99 |
| CDY10473 | Canola | nucleus | 23.17 | 26.96 |
| CDX77099 | Canola | nucleus | 18.09 | 26.95 |
| CDY69132 | Canola | nucleus | 23.02 | 26.83 |
| CDX71279 | Canola | nucleus | 15.55 | 26.8 |
| CDX84171 | Canola | nucleus | 23.47 | 26.7 |
| CDY48107 | Canola | nucleus | 22.72 | 26.43 |
| CDX84585 | Canola | nucleus | 26.46 | 26.38 |
| CDX75085 | Canola | nucleus | 23.92 | 25.48 |
| CDX79646 | Canola | nucleus | 26.31 | 25.47 |
| CDY55113 | Canola | nucleus | 19.73 | 25.24 |
| CDX80798 | Canola | nucleus | 19.58 | 24.62 |
| CDY45321 | Canola | nucleus, plastid | 23.02 | 22.48 |
| CDY13511 | Canola | nucleus | 14.5 | 22.2 |
| CDX72383 | Canola | nucleus | 14.5 | 21.46 |
| CDX68927 | Canola | nucleus | 14.65 | 21.26 |
| CDX75313 | Canola | nucleus | 14.8 | 21.24 |
| CDX68925 | Canola | cytosol | 3.89 | 14.36 |
| CDX68906 | Canola | nucleus | 4.19 | 10.81 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078CHR9 | EnsemblPlants:CDX75604 | ProteinID:CDX75604 | ProteinID:CDX75604.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00121514001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | UniParc:UPI0004EEBB36 | SEG:seg | : | : | : |
Description
BnaA01g00980D
Coordinates
chrLK031804:+:1875334..1880558
Molecular Weight (calculated)
73516.9 Da
IEP (calculated)
7.086
GRAVY (calculated)
-0.792
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDYHHQQH QGGFFSSSNG FNRSDSPNLT HQEKQEHQRV LEMDEESSVA RSGIPVYEPA GMLSEMFNFQ RSSGGGGGGG GDFDHSQSFR SNRQLLEQQH
101: HNIPAMNSAA GMQLFLPQQP PSTRSHHGSS TLHMLLPNPS HHQGYPNTMS MHQLPHQQLT WQSSPDHHHN TQTDIGTVHV ENSGGGQGLS LSLSSSLEAA
201: VKAEEYRKFY YGSNLSSHHQ YNEVSNHFLS SPAAASSSSS IGAINILRNS KYTKAAQELL EEFCSVGRGF SKKNKPKNKS NPNTSGGDGS SSGGAGGSPS
301: SAGASKEHPP LSASDRIEHQ RRKVKLLTML EEVDRRYNHY CEQMQMVVNS FDIVMGHGAA IPYTALAQKA MSRHFRCLKD AVAAQLRQSC ELLGEKDAAG
401: LSSSGLTKGD TPRLRLLEQS LRQQRAFHQM GMMEQEAWRP QRGLPERSVN ILRAWLFEHF LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV
501: EEMYQQESKE REERLEENEQ EDQETKNNSS NDKSTKPNNN ESNFTAVRTT SQTPTTAAQS AATPPDAGHH RLRSAADINA YENDPSSSSH SNAAAVVSSY
601: GGSTAFSAIA TCQQGVGGFA DADMDGDNNV IRFGTINPTG DVSLTLGLRH AGNIPDKNAS FCVRDFGGF
101: HNIPAMNSAA GMQLFLPQQP PSTRSHHGSS TLHMLLPNPS HHQGYPNTMS MHQLPHQQLT WQSSPDHHHN TQTDIGTVHV ENSGGGQGLS LSLSSSLEAA
201: VKAEEYRKFY YGSNLSSHHQ YNEVSNHFLS SPAAASSSSS IGAINILRNS KYTKAAQELL EEFCSVGRGF SKKNKPKNKS NPNTSGGDGS SSGGAGGSPS
301: SAGASKEHPP LSASDRIEHQ RRKVKLLTML EEVDRRYNHY CEQMQMVVNS FDIVMGHGAA IPYTALAQKA MSRHFRCLKD AVAAQLRQSC ELLGEKDAAG
401: LSSSGLTKGD TPRLRLLEQS LRQQRAFHQM GMMEQEAWRP QRGLPERSVN ILRAWLFEHF LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV
501: EEMYQQESKE REERLEENEQ EDQETKNNSS NDKSTKPNNN ESNFTAVRTT SQTPTTAAQS AATPPDAGHH RLRSAADINA YENDPSSSSH SNAAAVVSSY
601: GGSTAFSAIA TCQQGVGGFA DADMDGDNNV IRFGTINPTG DVSLTLGLRH AGNIPDKNAS FCVRDFGGF
001: MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
Arabidopsis Description
BLH2BEL1-like homeodomain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.