Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039212.1-P | Field mustard | nucleus | 99.34 | 99.34 |
| CDX76849 | Canola | nucleus | 95.23 | 96.34 |
| CDY62523 | Canola | nucleus | 91.61 | 85.96 |
| CDY39669 | Canola | nucleus | 90.95 | 85.74 |
| AT2G23760.4 | Thale cress | nucleus | 87.5 | 78.35 |
| CDX75604 | Canola | nucleus | 67.93 | 61.73 |
| CDX69252 | Canola | nucleus | 67.6 | 61.62 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 30.1 | 57.73 |
| CDY22463 | Canola | nucleus | 63.32 | 57.46 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 27.63 | 56.57 |
| CDY24765 | Canola | nucleus | 61.51 | 56.07 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 27.8 | 55.78 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 35.53 | 54.27 |
| CDX83753 | Canola | nucleus | 15.62 | 50.0 |
| KRH28575 | Soybean | nucleus | 55.1 | 47.52 |
| KRH76894 | Soybean | nucleus | 55.26 | 47.32 |
| KRH69971 | Soybean | nucleus | 50.16 | 45.25 |
| Solyc02g089940.2.1 | Tomato | nucleus | 52.14 | 43.66 |
| PGSC0003DMT400026172 | Potato | nucleus | 52.8 | 43.5 |
| KRH08329 | Soybean | nucleus | 54.77 | 42.86 |
| CDY45383 | Canola | nucleus | 18.09 | 41.83 |
| VIT_04s0023g01020.t01 | Wine grape | nucleus | 57.73 | 41.49 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 44.74 | 39.77 |
| CDY21826 | Canola | extracellular, plastid | 6.25 | 39.58 |
| CDX73171 | Canola | nucleus | 17.93 | 37.72 |
| CDY47523 | Canola | nucleus | 17.76 | 37.37 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 45.23 | 37.11 |
| Zm00001d033898_P002 | Maize | nucleus | 45.89 | 36.95 |
| EER93512 | Sorghum | nucleus, plastid | 46.71 | 36.88 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 45.56 | 35.93 |
| Os03t0732100-01 | Rice | nucleus | 46.38 | 35.7 |
| CDY46209 | Canola | nucleus | 21.88 | 35.19 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 45.72 | 34.62 |
| CDX89711 | Canola | nucleus | 25.82 | 34.51 |
| CDY29411 | Canola | nucleus | 22.04 | 34.45 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 45.56 | 34.24 |
| CDY02261 | Canola | nucleus | 25.16 | 34.08 |
| CDX75307 | Canola | nucleus | 12.17 | 33.33 |
| CDY52073 | Canola | nucleus | 25.16 | 32.48 |
| CDY39031 | Canola | nucleus | 25.33 | 32.22 |
| CDX68129 | Canola | nucleus | 24.18 | 31.08 |
| CDY44476 | Canola | nucleus | 28.62 | 30.63 |
| CDY47524 | Canola | nucleus | 25.82 | 30.43 |
| CDX73170 | Canola | nucleus | 25.66 | 30.35 |
| CDX85896 | Canola | nucleus | 24.67 | 29.82 |
| CDX96653 | Canola | nucleus | 23.19 | 27.87 |
| CDY39359 | Canola | nucleus | 23.52 | 27.55 |
| CDY63699 | Canola | nucleus | 18.91 | 27.51 |
| CDX71279 | Canola | nucleus | 17.27 | 27.06 |
| CDY30566 | Canola | nucleus | 19.9 | 27.01 |
| CDX77099 | Canola | nucleus | 19.9 | 26.95 |
| CDY40420 | Canola | nucleus | 27.3 | 26.27 |
| CDY32069 | Canola | nucleus | 27.3 | 26.1 |
| CDY40327 | Canola | nucleus | 24.67 | 25.95 |
| CDY10473 | Canola | nucleus | 24.51 | 25.91 |
| CDY69132 | Canola | nucleus | 24.01 | 25.44 |
| CDY48107 | Canola | nucleus | 24.01 | 25.39 |
| CDX84171 | Canola | nucleus | 23.85 | 24.66 |
| CDX84585 | Canola | nucleus | 27.14 | 24.59 |
| CDX79646 | Canola | nucleus | 27.14 | 23.88 |
| CDY55113 | Canola | nucleus | 20.39 | 23.71 |
| CDX75085 | Canola | nucleus | 24.34 | 23.57 |
| CDX80798 | Canola | nucleus | 20.07 | 22.93 |
| CDY13511 | Canola | nucleus | 16.12 | 22.43 |
| CDY45321 | Canola | nucleus, plastid | 25.16 | 22.34 |
| CDX68927 | Canola | nucleus | 16.61 | 21.91 |
| CDX75313 | Canola | nucleus | 16.78 | 21.89 |
| CDX72383 | Canola | nucleus | 15.62 | 21.02 |
| CDX68925 | Canola | cytosol | 4.44 | 14.92 |
| CDX68906 | Canola | nucleus | 5.1 | 11.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078I895 | UniProt:A0A078I895 | EnsemblPlants:CDY46061 | ProteinID:CDY46061 |
| ProteinID:CDY46061.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00083208001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom |
| PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 |
| UniParc:UPI0004EE657D | SEG:seg | : | : | : | : |
Description
BnaA09g41850DBnaA09g41850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I895]
Coordinates
chrLK032649:+:21663..26737
Molecular Weight (calculated)
67583.3 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.748
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDYHHPQG IFSFSNGFHR PSSSHQEEVE ESAVSGAPIP VYETAGMLSE MFSYPGGGSG EILDHSTKQL LEQQNRHNNN NNSTLHMLLP NHHQGFGYAN
101: EQQQHHFTWP SSSDHQSQGD MIGTVHVEGG KGLSLSLSSS LEAAAAAKAE EYRSIYCAAV DGTSSSNTSA HHHHQFNQFK TLLLDNSTSH HQAVGHFGSS
201: SSSPMGASSS IGGIYTLRNS KYTKPAQELL EEFCSVGRGH FKKNKLSRNN SNPNTSGGGG SSSSPGVAND NPPLSPADRI EHQRRKVKLL SMLEEVDRRY
301: NHYCEQMQMV VNSFDQVMGY GAAIPYTTLA QKAMSRHFRC LKDAVLVQLK RSCELLGEKE TSGAASSGLT KGETPRLRLL EQSLRQQRAF HHMGMMEQEA
401: WRPQRGLPER SVNILRAWLF EHFLNPYPSD ADKHLLARQT GLSRNQVSNW FINARVRLWK PMVEEMYQQE AKEREEKELE ENQKEDYHQT NNSSNNSDTK
501: PNESNFTLVQ TITAQTPTTT MMTPTPHEND SSFLPSSVVT AAPHSVSDAF TAATCQQDVS DHFQVNDGVI RFGTKQAGDV SLTLGLRHTG NMPDNKNPSF
601: SVRDFGDF
101: EQQQHHFTWP SSSDHQSQGD MIGTVHVEGG KGLSLSLSSS LEAAAAAKAE EYRSIYCAAV DGTSSSNTSA HHHHQFNQFK TLLLDNSTSH HQAVGHFGSS
201: SSSPMGASSS IGGIYTLRNS KYTKPAQELL EEFCSVGRGH FKKNKLSRNN SNPNTSGGGG SSSSPGVAND NPPLSPADRI EHQRRKVKLL SMLEEVDRRY
301: NHYCEQMQMV VNSFDQVMGY GAAIPYTTLA QKAMSRHFRC LKDAVLVQLK RSCELLGEKE TSGAASSGLT KGETPRLRLL EQSLRQQRAF HHMGMMEQEA
401: WRPQRGLPER SVNILRAWLF EHFLNPYPSD ADKHLLARQT GLSRNQVSNW FINARVRLWK PMVEEMYQQE AKEREEKELE ENQKEDYHQT NNSSNNSDTK
501: PNESNFTLVQ TITAQTPTTT MMTPTPHEND SSFLPSSVVT AAPHSVSDAF TAATCQQDVS DHFQVNDGVI RFGTKQAGDV SLTLGLRHTG NMPDNKNPSF
601: SVRDFGDF
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.