Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75604 | Canola | nucleus | 96.55 | 96.26 |
| CDY24765 | Canola | nucleus | 78.86 | 78.86 |
| CDY22463 | Canola | nucleus | 79.16 | 78.81 |
| AT4G36870.2 | Thale cress | nucleus | 83.21 | 75.1 |
| CDX76849 | Canola | nucleus | 61.62 | 68.39 |
| CDY46061 | Canola | nucleus | 61.62 | 67.6 |
| CDY39669 | Canola | nucleus | 62.67 | 64.81 |
| CDY62523 | Canola | nucleus | 62.67 | 64.51 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 28.94 | 60.88 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 26.39 | 59.26 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 26.84 | 59.08 |
| VIT_18s0001g11800.t01 | Wine grape | nucleus | 30.28 | 57.88 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 33.13 | 55.53 |
| CDX83753 | Canola | nucleus | 14.69 | 51.58 |
| Solyc04g079830.2.1 | Tomato | nucleus | 45.28 | 43.64 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 44.23 | 43.13 |
| CDY45383 | Canola | nucleus | 16.49 | 41.83 |
| CDY21826 | Canola | extracellular, plastid | 5.85 | 40.62 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 44.68 | 40.22 |
| EER93512 | Sorghum | nucleus, plastid | 45.73 | 39.61 |
| Zm00001d033898_P002 | Maize | nucleus | 44.68 | 39.47 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 45.13 | 39.04 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 45.13 | 37.48 |
| Os03t0732100-01 | Rice | nucleus | 44.38 | 37.47 |
| CDX73171 | Canola | nucleus | 16.04 | 37.02 |
| CDY47523 | Canola | nucleus | 15.89 | 36.68 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 44.38 | 36.59 |
| CDX89711 | Canola | nucleus | 24.14 | 35.38 |
| CDY02261 | Canola | nucleus | 23.54 | 34.97 |
| CDY46209 | Canola | nucleus | 19.64 | 34.66 |
| CDY29411 | Canola | nucleus | 20.09 | 34.45 |
| CDX75307 | Canola | nucleus | 11.24 | 33.78 |
| CDY52073 | Canola | nucleus | 22.94 | 32.48 |
| CDY39031 | Canola | nucleus | 22.94 | 32.01 |
| CDY44476 | Canola | nucleus | 26.69 | 31.34 |
| CDX68129 | Canola | nucleus | 22.19 | 31.29 |
| CDY47524 | Canola | nucleus | 23.84 | 30.81 |
| CDX73170 | Canola | nucleus | 23.69 | 30.74 |
| CDX85896 | Canola | nucleus | 22.49 | 29.82 |
| CDX96653 | Canola | nucleus | 21.59 | 28.46 |
| CDY63699 | Canola | nucleus | 17.69 | 28.23 |
| CDY39359 | Canola | nucleus | 21.74 | 27.94 |
| CDY40420 | Canola | nucleus | 26.09 | 27.53 |
| CDY32069 | Canola | nucleus | 26.09 | 27.36 |
| CDY40327 | Canola | nucleus | 23.39 | 26.99 |
| CDY10473 | Canola | nucleus | 23.24 | 26.96 |
| CDY30566 | Canola | nucleus | 17.99 | 26.79 |
| CDX77099 | Canola | nucleus | 17.99 | 26.73 |
| CDX84171 | Canola | nucleus | 23.39 | 26.53 |
| CDY69132 | Canola | nucleus | 22.79 | 26.48 |
| CDX71279 | Canola | nucleus | 15.29 | 26.29 |
| CDX84585 | Canola | nucleus | 26.39 | 26.23 |
| CDY48107 | Canola | nucleus | 22.49 | 26.09 |
| CDX79646 | Canola | nucleus | 26.24 | 25.33 |
| CDX75085 | Canola | nucleus | 23.84 | 25.32 |
| CDY55113 | Canola | nucleus | 19.79 | 25.24 |
| CDX80798 | Canola | nucleus | 19.64 | 24.62 |
| CDY45321 | Canola | nucleus, plastid | 22.79 | 22.19 |
| CDY13511 | Canola | nucleus | 14.24 | 21.74 |
| CDX68927 | Canola | nucleus | 14.69 | 21.26 |
| CDX75313 | Canola | nucleus | 14.84 | 21.24 |
| CDX72383 | Canola | nucleus | 14.24 | 21.02 |
| CDX68925 | Canola | cytosol | 3.9 | 14.36 |
| CDX68906 | Canola | nucleus | 4.05 | 10.42 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078BY39 | EnsemblPlants:CDX69252 | ProteinID:CDX69252 | ProteinID:CDX69252.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00131067001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | UniParc:UPI0004EE9CAF | SEG:seg | : | : | : |
Description
BnaC01g02010D
Coordinates
chrLK031789:+:3742860..3747724
Molecular Weight (calculated)
73405.7 Da
IEP (calculated)
7.154
GRAVY (calculated)
-0.786
Length
667 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDYHHQQH QGGFFSFSNG FNRSDSPNLT HQEKQEHQRV LDMDEESSVA RSGIPVYEPA GMLSEMFNFH RSSGGGGGGG GGDFDHSQSF PSNRQLLEQQ
101: HQNIPAMNSA AGMQLFLPQQ PPSTRSHHGS STLHMLLPNP SHHQGYTNTM SMHQLPHQQL TWQSSSDHHH HHHHHHNIGT VHVENSGGQG LSLSLSSSLE
201: AAVKAEEYRK FYYGSNLSSH HQYNEVSNHF LSSPAAASSS SSIGAINILR NSRYTKVAQE LLEEFCSVGR GFSKKNKPKN KSNPNTSGGD GSSSGGAGGS
301: PSSAGASKDH PPLSASDRIE HQRRKVKLLT MLEEVDRRYN HYCEQMQMVV NSFDIVMGHG AAIPYTALAQ KAMSRHFRCL KDAVAAQLRQ SCELLGEKDA
401: AGLSSSGLTK GDTPRLRLLE QSLRQQRAFH QMGMMEQEAW RPQRGLPERS VNILRAWLFE HFLHPYPSDA DKHLLARQTG LSRNQVSNWF INARVRLWKP
501: MVEEMYQQES KEREENEQED QETKNNSSND KSTKSNNNES NFTAVRTTSQ TPTTAAQSAA TPPDAGHRLR SAADINAYEN DPSSFSHSNA AAAVVSSYGG
601: STAFSAIATC QQGVGGFDDA DMDGDNNVIR FGTTNPTGDV SLTLGLRHAG NIPDKNASFC VRDFGGF
101: HQNIPAMNSA AGMQLFLPQQ PPSTRSHHGS STLHMLLPNP SHHQGYTNTM SMHQLPHQQL TWQSSSDHHH HHHHHHNIGT VHVENSGGQG LSLSLSSSLE
201: AAVKAEEYRK FYYGSNLSSH HQYNEVSNHF LSSPAAASSS SSIGAINILR NSRYTKVAQE LLEEFCSVGR GFSKKNKPKN KSNPNTSGGD GSSSGGAGGS
301: PSSAGASKDH PPLSASDRIE HQRRKVKLLT MLEEVDRRYN HYCEQMQMVV NSFDIVMGHG AAIPYTALAQ KAMSRHFRCL KDAVAAQLRQ SCELLGEKDA
401: AGLSSSGLTK GDTPRLRLLE QSLRQQRAFH QMGMMEQEAW RPQRGLPERS VNILRAWLFE HFLHPYPSDA DKHLLARQTG LSRNQVSNWF INARVRLWKP
501: MVEEMYQQES KEREENEQED QETKNNSSND KSTKSNNNES NFTAVRTTSQ TPTTAAQSAA TPPDAGHRLR SAADINAYEN DPSSFSHSNA AAAVVSSYGG
601: STAFSAIATC QQGVGGFDDA DMDGDNNVIR FGTTNPTGDV SLTLGLRHAG NIPDKNASFC VRDFGGF
001: MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
Arabidopsis Description
BLH2BEL1-like homeodomain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.