CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016497.1-P	Field mustard	nucleus	97.43	98.6
CDX83753	Canola	nucleus	34.39	91.58
CDY63699	Canola	nucleus	69.76	84.45
CDY39359	Canola	nucleus	74.9	73.03
CDY29411	Canola	nucleus	56.13	73.01
AT1G19700.3	Thale cress	nucleus	73.52	69.14
CDX68129	Canola	nucleus	57.11	61.1
CDY52073	Canola	nucleus	56.72	60.93
CDY39031	Canola	nucleus	57.11	60.46
CDY47524	Canola	nucleus	59.49	58.33
CDX85896	Canola	nucleus	57.91	58.25
CDX73170	Canola	nucleus	58.89	57.98
CDY21826	Canola	extracellular, plastid	8.89	46.88
CDY02261	Canola	nucleus	35.18	39.64
CDY47523	Canola	nucleus	22.53	39.45
CDX73171	Canola	nucleus	22.53	39.45
CDY46209	Canola	nucleus	29.25	39.15
CDX89711	Canola	nucleus	34.78	38.68
CDX75307	Canola	nucleus	16.8	38.29
KRH51792	Soybean	nucleus	40.32	32.03
KRH61114	Soybean	nucleus	40.51	31.73
KRH05875	Soybean	nucleus	37.75	31.26
KRH15136	Soybean	nucleus	39.13	31.13
CDY45383	Canola	nucleus	16.01	30.8
VIT_18s0001g13150.t01	Wine grape	nucleus	40.32	29.23
CDX71279	Canola	nucleus	22.33	29.12
Solyc04g080790.2.1	Tomato	nucleus	37.94	29.05
PGSC0003DMT400009610	Potato	nucleus	37.35	28.59
CDX77099	Canola	nucleus	23.32	26.28
CDY30566	Canola	nucleus	23.12	26.12
CDY40420	Canola	nucleus	32.21	25.79
CDY32069	Canola	nucleus	32.21	25.63
CDX84171	Canola	nucleus	29.45	25.34
CDX84585	Canola	nucleus	32.41	24.44
CDY45321	Canola	nucleus, plastid	32.61	24.09
CDX75085	Canola	nucleus	29.64	23.89
CDX79646	Canola	nucleus	32.41	23.73
CDX76849	Canola	nucleus	27.67	23.29
CDY46061	Canola	nucleus	27.87	23.19
CDY44476	Canola	nucleus	25.89	23.06
CDY39669	Canola	nucleus	28.06	22.02
CDY22463	Canola	nucleus	29.05	21.94
CDY62523	Canola	nucleus	28.06	21.91
CDY24765	Canola	nucleus	28.85	21.89
CDY40327	Canola	nucleus	24.9	21.8
CDY10473	Canola	nucleus	24.7	21.74
CDX68927	Canola	nucleus	19.76	21.69
CDX69252	Canola	nucleus	28.46	21.59
CDX75313	Canola	nucleus	19.76	21.46
CDX75604	Canola	nucleus	28.26	21.38
CDY13511	Canola	nucleus	18.38	21.28
CDY69132	Canola	nucleus	23.91	21.08
CDX68925	Canola	cytosol	7.51	20.99
CDY48107	Canola	nucleus	23.72	20.87
CDX72383	Canola	nucleus	18.38	20.58
CDY55113	Canola	nucleus	20.16	19.5
CDX80798	Canola	nucleus	20.36	19.36
CDX68906	Canola	nucleus	4.35	8.49

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:A0A078EBA4	EnsemblPlants:CDX96653	ProteinID:CDX96653	ProteinID:CDX96653.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00102858001
InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526
InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF65	SMART:SM00389	SMART:SM00574
SUPFAM:SSF46689	UniParc:UPI0004EE73AE	SEG:seg	:	:	:

Description

BnaA08g21960D

Coordinates

chrLK031895:+:442135..445204

Molecular Weight (calculated)

57185.1 Da

IEP (calculated)

5.794

GRAVY (calculated)

-0.755

Length

506 amino acids

Sequence
(BLAST)

001: MAVYYPSNVN CYQQEPIYLN HHHHQQQQQP SSSSAAAAAA SFVGGEENVR NEMVFIPPTG LQNLNGDVPV SSSELTFRDG QGLSLSLLGT QISLPSFHYH
101: QYSSISAKET PPFNKEMLLL GQSDPSSGYA GVYNSYNMSS VLRSRYLKPA QGLLDEVVSV EKEMNQLRKK KKGEDFNNSA KETEGGGGIG GEISIELSTI
201: ERQELRSKKD KLLTMLDEVD KRYNQYYHQM EALASSFEVV AGFGSPKPYT SVALNRISCH FRALRDAIKE QIKMIREKLG EKGGELSLDE QQGGERIPRL
301: RYLDQRLRQQ RALHQQLGMV RPCWRPQRGL PESSVSALRA WLFEHFLHPY PKESEKMMLA KQTGLSKNQV ANWFINARVR LWKPMIEEMY KEEFGDDASE
401: LLTSKSPNST NQEDSSSQQQ QQQENTTNVA FSSEPKPDCT QANEDDPQLH QMNRSGDYDT LMNYQGPNGQ PCLIDTVEFD ILSNMMQAVD EERYDEAGKA
501: RLSASH

Best Arabidopsis Sequence Match ( AT1G19700.1 )
(BLAST)

001: MAVYYTSNVG CYQQEPIFLN HQQQNQQASS SSAAASFTVT GGDTVRNEMV FIPPTTTGDV VTGNGTVSSS DLSFHDGQGL SLSLGTQISV APFHFHQYQL
101: GFTSQNPSIS VKETSPFHVD EMSVKSKEMI LLGQSDPSSG YAGNGGNGFY NNYRYNETSG GFMSSVLRSR YLKPAQNLLD EVVSVKKELN QMGKKKMKVN
201: DFNSGSKEIE GGGGELSSDS NGKSIELSTI EREELQNKKN KLLTMVDEVD KRYNQYYHQM EALASSFEIV AGLGSAKPYT SVALNRISRH FRALRDAIKE
301: QIQIVREKLG EKGGESLDEQ QGERIPRLRY LDQRLRQQRA LHQQLGMVRP AWRPQRGLPE NSVSVLRAWL FEHFLHPYPK ESEKIMLAKQ TGLSKNQVAN
401: WFINARVRLW KPMIEEMYKE EFGDESELLI SKSSQEPNST NQEDSSSQQQ QQQENNNNSN LAYSSADTTN IVFSSETKPD RVLGNDNDPQ QQQINRSSDY
501: DTLMNYHGFG VDDYRYISGS NQQESRFSNS HHLHDFVV

Arabidopsis Description

BLH10BEL1-like homeodomain protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.