CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83753	Canola	nucleus	35.89	78.95
CDX96653	Canola	nucleus	84.45	69.76
CDY29411	Canola	nucleus	63.16	67.87
CDY39359	Canola	nucleus	77.51	62.43
AT1G19700.3	Thale cress	nucleus	78.23	60.78
CDX68129	Canola	nucleus	60.29	53.28
CDY52073	Canola	nucleus	59.81	53.08
CDY39031	Canola	nucleus	59.33	51.88
CDY47524	Canola	nucleus	61.24	49.61
CDX85896	Canola	nucleus	59.33	49.3
CDX73170	Canola	nucleus	60.53	49.22
CDX73171	Canola	nucleus	23.68	34.26
CDY47523	Canola	nucleus	23.68	34.26
CDY21826	Canola	extracellular, plastid	7.66	33.33
CDY46209	Canola	nucleus	29.67	32.8
CDY02261	Canola	nucleus	34.93	32.52
CDX89711	Canola	nucleus	34.93	32.09
CDX75307	Canola	nucleus	16.27	30.63
CDX71279	Canola	nucleus	27.51	29.64
KRH51792	Soybean	nucleus	43.3	28.41
KRH61114	Soybean	nucleus	43.3	28.02
KRH15136	Soybean	nucleus	41.39	27.2
KRH05875	Soybean	nucleus	39.47	27.0
VIT_18s0001g13150.t01	Wine grape	nucleus	41.87	25.07
Solyc04g080790.2.1	Tomato	nucleus	39.47	24.96
CDY45383	Canola	nucleus	15.55	24.71
PGSC0003DMT400009610	Potato	nucleus	39.0	24.66
CDX77099	Canola	nucleus	24.64	22.94
CDY30566	Canola	nucleus	24.4	22.77
CDY40420	Canola	nucleus	32.3	21.36
CDY32069	Canola	nucleus	32.3	21.23
CDY45321	Canola	nucleus, plastid	34.45	21.02
CDX84171	Canola	nucleus	29.19	20.75
CDX84585	Canola	nucleus	32.3	20.12
CDY40327	Canola	nucleus	27.27	19.72
CDY10473	Canola	nucleus	27.03	19.65
CDX75085	Canola	nucleus	29.43	19.59
CDX79646	Canola	nucleus	32.3	19.54
CDX68925	Canola	cytosol	8.37	19.34
CDY44476	Canola	nucleus	26.08	19.19
CDY69132	Canola	nucleus	26.32	19.16
CDX76849	Canola	nucleus	27.27	18.97
CDY48107	Canola	nucleus	26.08	18.96
CDY55113	Canola	nucleus	23.68	18.93
CDY46061	Canola	nucleus	27.51	18.91
CDX80798	Canola	nucleus	23.68	18.61
CDY39669	Canola	nucleus	27.75	17.98
CDY22463	Canola	nucleus	28.71	17.91
CDY62523	Canola	nucleus	27.75	17.9
CDY24765	Canola	nucleus	28.47	17.84
CDX69252	Canola	nucleus	28.23	17.69
CDX75604	Canola	nucleus	28.23	17.64
CDX68927	Canola	nucleus	19.38	17.57
CDX75313	Canola	nucleus	19.14	17.17
CDY13511	Canola	nucleus	17.94	17.16
CDX72383	Canola	nucleus	17.46	16.15
CDX68906	Canola	nucleus	4.78	7.72

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:A0A078JF98	UniProt:A0A078JF98	EnsemblPlants:CDY63699	ProteinID:CDY63699
ProteinID:CDY63699.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00039552001	InterPro:Homeobox-like_sf
InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom
PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF65	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
UniParc:UPI0004EE0EC5	SEG:seg	:	:	:	:

Description

BnaC08g19170DBnaC08g19170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF98]

Coordinates

chrLK034339:-:9598..11310

Molecular Weight (calculated)

47233.0 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.694

Length

418 amino acids

Sequence
(BLAST)

001: MVFIPPTGLQ NLNGDVPVSS SELTFRDGQG LSLSLLGTQI SLPSFHYQQY QSGFTTNPPI SVQETPPFSK EMLLLGQSDP SSGYAEVYNN YNMSSVLRSR
101: YLKPAQVLLD EVVSVEKELN QMRKKKKGEA FNNSANETEG GGGFGGEISI ELSTIERQEL QSKKDKLLTM VDEVDKRYNQ YYHQMEALAS SFEVVAGFGS
201: AKPYTSVALN RISCHFRSFR DAIKEHIQVI REKLGEKGGE LSLDEQQGGE RIPRLSSVSA LRAWLFEHFL HPYPKESEKM MLAKQTRLSK NQVANWFINA
301: RVRLWKPMIE EMYKEEFGDD ASELLTSKSP SSTNQEDSSS QQQEPENTTN VAFSSEPKPD CTSANEDDPQ LHQMNRSADY DSLVNYHGFG VDDYRYIDGN
401: NQQESRFSNG HHLHDFVV

Best Arabidopsis Sequence Match ( AT1G19700.1 )
(BLAST)

001: MAVYYTSNVG CYQQEPIFLN HQQQNQQASS SSAAASFTVT GGDTVRNEMV FIPPTTTGDV VTGNGTVSSS DLSFHDGQGL SLSLGTQISV APFHFHQYQL
101: GFTSQNPSIS VKETSPFHVD EMSVKSKEMI LLGQSDPSSG YAGNGGNGFY NNYRYNETSG GFMSSVLRSR YLKPAQNLLD EVVSVKKELN QMGKKKMKVN
201: DFNSGSKEIE GGGGELSSDS NGKSIELSTI EREELQNKKN KLLTMVDEVD KRYNQYYHQM EALASSFEIV AGLGSAKPYT SVALNRISRH FRALRDAIKE
301: QIQIVREKLG EKGGESLDEQ QGERIPRLRY LDQRLRQQRA LHQQLGMVRP AWRPQRGLPE NSVSVLRAWL FEHFLHPYPK ESEKIMLAKQ TGLSKNQVAN
401: WFINARVRLW KPMIEEMYKE EFGDESELLI SKSSQEPNST NQEDSSSQQQ QQQENNNNSN LAYSSADTTN IVFSSETKPD RVLGNDNDPQ QQQINRSSDY
501: DTLMNYHGFG VDDYRYISGS NQQESRFSNS HHLHDFVV

Arabidopsis Description

BLH10BEL1-like homeodomain protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.