CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015845.1-P	Field mustard	nucleus	99.61	99.04
CDX73170	Canola	nucleus	95.93	96.3
CDY52073	Canola	nucleus	76.55	83.86
CDY39031	Canola	nucleus	77.33	83.47
CDX68129	Canola	nucleus	75.78	82.66
AT1G75410.2	Thale cress	nucleus	82.75	81.49
CDX83753	Canola	nucleus	29.46	80.0
CDX85896	Canola	nucleus	77.52	79.52
CDY29411	Canola	nucleus	50.19	66.58
CDY39359	Canola	nucleus	61.63	61.27
CDY63699	Canola	nucleus	49.61	61.24
CDX96653	Canola	nucleus	58.33	59.49
CDY21826	Canola	extracellular, plastid	8.72	46.88
CDY02261	Canola	nucleus	35.66	40.98
CDX73171	Canola	nucleus	22.87	40.83
CDY47523	Canola	nucleus	22.67	40.48
CDY46209	Canola	nucleus	29.46	40.21
CDX89711	Canola	nucleus	35.27	40.0
CDX75307	Canola	nucleus	16.28	37.84
KRH05875	Soybean	nucleus	41.09	34.7
KRH51792	Soybean	nucleus	42.83	34.69
KRH15136	Soybean	nucleus	42.44	34.43
KRH61114	Soybean	nucleus	42.44	33.9
CDY45383	Canola	nucleus	17.25	33.84
CDX71279	Canola	nucleus	24.03	31.96
VIT_18s0001g13150.t01	Wine grape	nucleus	43.02	31.81
Solyc04g080790.2.1	Tomato	nucleus	40.7	31.77
PGSC0003DMT400009610	Potato	nucleus	40.31	31.47
CDY40420	Canola	nucleus	33.14	27.06
CDY32069	Canola	nucleus	33.33	27.04
CDY45321	Canola	nucleus, plastid	35.47	26.72
CDX84171	Canola	nucleus	30.23	26.53
CDX76849	Canola	nucleus	30.43	26.12
CDX77099	Canola	nucleus	22.67	26.06
CDY30566	Canola	nucleus	22.48	25.89
CDY46061	Canola	nucleus	30.43	25.82
CDX84585	Canola	nucleus	32.75	25.19
CDX75085	Canola	nucleus	30.43	25.0
CDX79646	Canola	nucleus	32.75	24.46
CDY39669	Canola	nucleus	30.43	24.34
CDY62523	Canola	nucleus	30.43	24.23
CDX69252	Canola	nucleus	30.81	23.84
CDY22463	Canola	nucleus	30.81	23.73
CDX75604	Canola	nucleus	30.62	23.62
CDY44476	Canola	nucleus	25.97	23.59
CDY24765	Canola	nucleus	30.43	23.54
CDY40327	Canola	nucleus	25.58	22.84
CDY10473	Canola	nucleus	25.19	22.61
CDY69132	Canola	nucleus	24.42	21.95
CDY48107	Canola	nucleus	24.22	21.74
CDX68927	Canola	nucleus	18.99	21.26
CDX75313	Canola	nucleus	19.19	21.24
CDY13511	Canola	nucleus	17.83	21.05
CDY55113	Canola	nucleus	20.54	20.27
CDX80798	Canola	nucleus	20.54	19.92
CDX72383	Canola	nucleus	17.25	19.69
CDX68925	Canola	cytosol	6.59	18.78
CDX68906	Canola	nucleus	4.07	8.11

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:A0A078IDU9	UniProt:A0A078IDU9	EnsemblPlants:CDY47524	ProteinID:CDY47524
ProteinID:CDY47524.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00087586001	InterPro:Homeobox-like_sf
InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom
PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF65	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
UniParc:UPI0004EE34BD	SEG:seg	:	:	:	:

Description

BnaAnng09220DBnaAnng09220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDU9]

Coordinates

chrLK032719:+:160656..163763

Molecular Weight (calculated)

58956.4 Da

IEP (calculated)

6.807

GRAVY (calculated)

-0.957

Length

516 amino acids

Sequence
(BLAST)

001: MAVYYPTSVG MQPLYQESIY LNEQQQQQQA SSSSAASFSG GGGGLDIPNS DGGVRHEMVF IPPTNDVVVT GLNESSSNDL SFQGGGLSLS LGNQIQYHYQ
101: NLSNQLNYSN DENGKSLSHH HHQHQAEQLP STGYSNGVGY YNNYRYETSG FVSSVLRSRY LKPTQQLLDE VVSVRKDMKL GESNKKTKNN NNDKGQDFTN
201: GPNNNNTENE KFPEELSPQE RQELQSKKNK LLTMADEVDK RYNQYYHQME AVASSFEMVA GHGAAKPYTS VALNRISRHF RCLRDAIKEQ IQVIRGKLGE
301: KETSEEQGER IPRLRYLDQR LRQQRALHQQ LGMVRPSWRP QRGLPENSVS ILRAWLFEHF LHPYPKESEK IMLAKQTGLS KNQVANWFIN ARVRLWKPMI
401: EEMYKEEFGD ASELLSNSNR DKNKMQETSQ LKHEDSYSSQ QHHQGNNNNN IAYTSAVEEN LVFTDPKPDR VTTTGDYDSL MNYQGFGVDD YNRYIGLGNQ
501: QDGRFSNPHQ LHDFVV

Best Arabidopsis Sequence Match ( AT1G75410.1 )
(BLAST)

001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV

Arabidopsis Description

BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.