Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034335.1-P | Field mustard | nucleus | 98.88 | 98.88 |
| CDX77099 | Canola | nucleus | 96.43 | 96.21 |
| AT2G27220.2 | Thale cress | nucleus | 70.76 | 70.6 |
| CDX83753 | Canola | nucleus | 17.63 | 41.58 |
| CDX75307 | Canola | nucleus | 17.19 | 34.68 |
| CDY47523 | Canola | nucleus | 20.54 | 31.83 |
| CDX73171 | Canola | nucleus | 20.54 | 31.83 |
| CDY21826 | Canola | extracellular, plastid | 6.47 | 30.21 |
| CDY46209 | Canola | nucleus | 25.45 | 30.16 |
| CDY45383 | Canola | nucleus | 17.41 | 29.66 |
| CDY29411 | Canola | nucleus | 25.22 | 29.05 |
| CDY02261 | Canola | nucleus | 28.35 | 28.29 |
| KRH26689 | Soybean | nucleus | 32.59 | 28.24 |
| CDX89711 | Canola | nucleus | 28.57 | 28.13 |
| Os11t0158600-00 | Rice | nucleus | 25.45 | 27.14 |
| CDX71279 | Canola | nucleus | 21.65 | 25.0 |
| CDX68129 | Canola | nucleus | 26.12 | 24.74 |
| CDY52073 | Canola | nucleus | 25.67 | 24.42 |
| CDY63699 | Canola | nucleus | 22.77 | 24.4 |
| CDX84171 | Canola | nucleus | 31.47 | 23.98 |
| CDY39031 | Canola | nucleus | 25.22 | 23.64 |
| CDY40420 | Canola | nucleus | 33.26 | 23.58 |
| CDY32069 | Canola | nucleus | 33.26 | 23.43 |
| CDX85896 | Canola | nucleus | 26.12 | 23.26 |
| CDX96653 | Canola | nucleus | 26.12 | 23.12 |
| CDY39359 | Canola | nucleus | 26.79 | 23.12 |
| CDX84585 | Canola | nucleus | 34.15 | 22.8 |
| CDX73170 | Canola | nucleus | 25.89 | 22.57 |
| Solyc11g068950.1.1 | Tomato | nucleus | 33.26 | 22.54 |
| CDY47524 | Canola | nucleus | 25.89 | 22.48 |
| PGSC0003DMT400015183 | Potato | nucleus | 33.93 | 22.22 |
| TraesCS4B01G114600.1 | Wheat | nucleus | 32.59 | 22.05 |
| CDX79646 | Canola | nucleus | 33.93 | 22.0 |
| TraesCS4A01G200800.1 | Wheat | nucleus | 32.59 | 21.99 |
| TraesCS4D01G111900.1 | Wheat | nucleus | 32.59 | 21.99 |
| CDX75085 | Canola | nucleus | 30.8 | 21.97 |
| HORVU4Hr1G020710.1 | Barley | nucleus | 25.22 | 21.73 |
| Solyc06g074120.2.1 | Tomato | nucleus | 33.71 | 21.6 |
| PGSC0003DMT400050527 | Potato | nucleus | 33.93 | 21.53 |
| KRH22635 | Soybean | nucleus | 33.71 | 21.51 |
| Zm00001d053151_P003 | Maize | nucleus | 32.14 | 21.46 |
| VIT_06s0009g00410.t01 | Wine grape | nucleus | 34.6 | 21.29 |
| EES09309 | Sorghum | nucleus | 32.14 | 20.87 |
| CDY10473 | Canola | nucleus | 26.79 | 20.87 |
| CDY40327 | Canola | nucleus | 26.79 | 20.76 |
| CDY44476 | Canola | nucleus | 26.12 | 20.6 |
| KRH25319 | Soybean | nucleus | 33.71 | 20.38 |
| CDY13511 | Canola | nucleus | 19.87 | 20.37 |
| CDX76849 | Canola | nucleus | 26.79 | 19.97 |
| CDY46061 | Canola | nucleus | 27.01 | 19.9 |
| KRG88864 | Soybean | nucleus | 33.93 | 19.9 |
| CDY69132 | Canola | nucleus | 25.45 | 19.86 |
| CDY48107 | Canola | nucleus | 25.22 | 19.65 |
| CDX68927 | Canola | nucleus | 20.09 | 19.52 |
| CDX68925 | Canola | cytosol | 7.81 | 19.34 |
| CDX72383 | Canola | nucleus | 19.42 | 19.25 |
| CDX75313 | Canola | nucleus | 19.87 | 19.1 |
| CDY39669 | Canola | nucleus | 27.23 | 18.91 |
| CDY62523 | Canola | nucleus | 27.23 | 18.83 |
| CDX75604 | Canola | nucleus | 27.01 | 18.09 |
| CDX69252 | Canola | nucleus | 26.79 | 17.99 |
| CDY55113 | Canola | nucleus | 20.98 | 17.97 |
| CDY45321 | Canola | nucleus, plastid | 26.56 | 17.37 |
| CDX80798 | Canola | nucleus | 20.54 | 17.29 |
| CDY24765 | Canola | nucleus | 25.67 | 17.24 |
| CDY22463 | Canola | nucleus | 25.45 | 17.01 |
| Os11t0158832-00 | Rice | nucleus | 7.37 | 12.55 |
| CDX68906 | Canola | nucleus | 4.24 | 7.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078GYM0 | UniProt:A0A078GYM0 | EnsemblPlants:CDY30566 | ProteinID:CDY30566 |
| ProteinID:CDY30566.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00045302001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom |
| PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF194 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 |
| UniParc:UPI0004EE3A57 | SEG:seg | : | : | : | : |
Description
BnaA04g15670DBnaA04g15670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYM0]
Coordinates
chrLK032254:+:486972..489353
Molecular Weight (calculated)
50423.8 Da
IEP (calculated)
7.632
GRAVY (calculated)
-0.546
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVFFQGETE MREPSSDLFM VNLNPSPDQT MTINAHNNHF YNLCFAPQQH PQRMNKYEVL DHIEQANCSA ISTVSNGRVT QSFRALAPTY LRVAQELLNE
101: IVHVGHGSRG AKQEQQMNNE SATYGLYNGV GNINGGPKPG VCRQELQLKR AKLISMVEKV EQIYKQYHDQ MQTVISSFEQ EAGLGSANSY THMALQTISK
201: KFRAVKNMIC LQIKRINNLL GEKECEGVSL AKQLGKMPDN HSNAWRPQRG LPETAVSVLR AWLFNHFLHP YPRDLDKEML AKQTGLTKSQ VSNWFINARV
301: RVWKPMVEEM YLEEMNIEES RKGGNLSEHG NKGSSSKQLC NNTTSDESSN LILPAFHQGF IENETSMQNS FSSCSVMTFG KQHVNQAKLI QFNGGFENYH
401: AMVGNGVSLS LGMPHSCDQS FNNIQFGSTS NETKISGIYP SLTYQNMD
101: IVHVGHGSRG AKQEQQMNNE SATYGLYNGV GNINGGPKPG VCRQELQLKR AKLISMVEKV EQIYKQYHDQ MQTVISSFEQ EAGLGSANSY THMALQTISK
201: KFRAVKNMIC LQIKRINNLL GEKECEGVSL AKQLGKMPDN HSNAWRPQRG LPETAVSVLR AWLFNHFLHP YPRDLDKEML AKQTGLTKSQ VSNWFINARV
301: RVWKPMVEEM YLEEMNIEES RKGGNLSEHG NKGSSSKQLC NNTTSDESSN LILPAFHQGF IENETSMQNS FSSCSVMTFG KQHVNQAKLI QFNGGFENYH
401: AMVGNGVSLS LGMPHSCDQS FNNIQFGSTS NETKISGIYP SLTYQNMD
001: MAAFFLGESE MREHSSDLFM MTLNPFREQT TTTNAHDDHF YNLCFGSQQY RPRDEVGHIE QGNSSISTFS NGGVFRALAP IYLKAAQELL NEIVNVGNGS
101: HGAKQERPVS KESTIYGVED INGGYKPGVA ALQMKKAKLI SMGEMVEQRY KQYHDQMQTI ISSFEQAAGL GSANSYTHMA LQTISKQFRA VKDMISLQIK
201: QINKLLGQKE FDEQLKKLGK MAHHHSNAWR PQRGLPEKAV SVLRSWLFEH FLHPYPRDLD KVMLAKQTGL TKSQVSNWFI NARVRMWKPL VEELYSEEMD
301: IEESRKGSDR YSTKGSSSKQ PYNNTTSNES SNTILPAFRQ GFTETETPRQ NSSSSCSVVM RFTKQHMNQA NFINFNGGFE NYHTMDGNSV SLSLGLPHSC
401: DQTFNNIHFE STSHGTENSA IYSSSTYQIM D
101: HGAKQERPVS KESTIYGVED INGGYKPGVA ALQMKKAKLI SMGEMVEQRY KQYHDQMQTI ISSFEQAAGL GSANSYTHMA LQTISKQFRA VKDMISLQIK
201: QINKLLGQKE FDEQLKKLGK MAHHHSNAWR PQRGLPEKAV SVLRSWLFEH FLHPYPRDLD KVMLAKQTGL TKSQVSNWFI NARVRMWKPL VEELYSEEMD
301: IEESRKGSDR YSTKGSSSKQ PYNNTTSNES SNTILPAFRQ GFTETETPRQ NSSSSCSVVM RFTKQHMNQA NFINFNGGFE NYHTMDGNSV SLSLGLPHSC
401: DQTFNNIHFE STSHGTENSA IYSSSTYQIM D
Arabidopsis Description
BLH5BEL1-like homeodomain 5 [Source:TAIR;Acc:AT2G27220]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.