CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88864	Soybean	nucleus	91.36	88.61
KRH26689	Soybean	nucleus	51.01	73.11
KRH22635	Soybean	nucleus	65.99	69.66
VIT_06s0009g00410.t01	Wine grape	nucleus	53.44	54.4
KRH72182	Soybean	nucleus	46.69	52.11
KRH32854	Soybean	nucleus	45.48	50.98
KRH68008	Soybean	nucleus	46.56	50.81
KRG96259	Soybean	nucleus	46.29	50.44
PGSC0003DMT400015183	Potato	nucleus	43.59	47.22
Solyc06g074120.2.1	Tomato	nucleus	44.13	46.78
PGSC0003DMT400050527	Potato	nucleus	44.4	46.6
Solyc11g068950.1.1	Tomato	nucleus	40.76	45.69
Os11t0158600-00	Rice	nucleus	25.24	44.52
TraesCS4D01G111900.1	Wheat	nucleus	37.65	42.02
TraesCS4B01G114600.1	Wheat	nucleus	37.52	41.99
TraesCS4A01G200800.1	Wheat	nucleus	37.38	41.72
Zm00001d053151_P003	Maize	nucleus	37.25	41.13
HORVU4Hr1G020710.1	Barley	nucleus	28.34	40.38
EES09309	Sorghum	nucleus	37.52	40.29
Os11t0158832-00	Rice	nucleus	12.96	36.5
KRH51485	Soybean	nucleus	26.45	35.25
AT2G27220.2	Thale cress	nucleus	21.19	34.97
KRH61118	Soybean	nucleus	20.65	34.77
KRH51793	Soybean	nucleus	20.65	34.23
Bra034335.1-P	Field mustard	nucleus	20.38	33.71
CDY30566	Canola	nucleus	20.38	33.71
CDX77099	Canola	nucleus	20.38	33.63
KRH60794	Soybean	nucleus	29.42	32.93
KRH15136	Soybean	nucleus	26.86	31.29
KRH05875	Soybean	nucleus	25.37	30.77
KRH51792	Soybean	nucleus	26.18	30.46
KRH61114	Soybean	nucleus	26.32	30.19
KRH00065	Soybean	nucleus	23.21	30.02
KRH27902	Soybean	nucleus	25.37	29.28
KRH77572	Soybean	nucleus	25.37	29.1
KRH59951	Soybean	nucleus	24.56	28.66
KRH75724	Soybean	nucleus	23.21	28.24
KRH41225	Soybean	nucleus	24.16	27.71
KRH65931	Soybean	nucleus	22.81	27.39
KRH76894	Soybean	nucleus	26.05	27.18
KRH28575	Soybean	nucleus	25.78	27.09
KRH69971	Soybean	nucleus	23.89	26.26
KRH08329	Soybean	nucleus	26.59	25.35
KRH52190	Soybean	nucleus	17.68	23.86
KRH25064	Soybean	nucleus	24.29	23.68
KRH30618	Soybean	nucleus	24.29	23.44
KRH61499	Soybean	nucleus	17.27	22.26
KRH22860	Soybean	nucleus	23.35	22.01
KRH26495	Soybean	nucleus	23.08	21.54
KRH05496	Soybean	nucleus	16.33	21.19

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100786883	MapMan:15.5.3.5	EMBL:ACUP02007236	ncoils:Coil	EnsemblPlantsGene:GLYMA_12G094800
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
UniProt:K7LTX2	EnsemblPlants:KRH25319	ProteinID:KRH25319	ProteinID:KRH25319.1	ProteinID:KRH25320.1	PFAM:PF05920
PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF135	SMART:SM00389
SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000233C5D8	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:+:7875178..7880955

Molecular Weight (calculated)

81122.6 Da

IEP (calculated)

7.725

GRAVY (calculated)

-0.676

Length

741 amino acids

Sequence
(BLAST)

001: MATYFHGSTS EIPSSAEGLQ TLYLMNPNYV PYSDAAQHPT QNMLLVNPNN NNTSNTSPTS TNALNLGNFS HAPPPPSPNN NNNHREQQQH HLIGVTIPSS
101: NILGSNAAAT DPARSSFLGQ HEFSSFHGGA AATSTVTASR GNYNLWGSII DQSALNIMAA TTHTPSSNMG CVASSVMSTQ IGFHRPNHLS LSLSSQQTPY
201: RSLSGEIHAI SPASRGGGGD DMRGLHNGVS SMHSVALGSK YLKATQELLD EVVNVGKGIS KGEESMEGAK KEKMKGNIES TSGVGDGSSC GRENNDRAKQ
301: GVELSTAQRQ ELQMKKSKLV TMLDEVEQRY RQYHHQMQVV LTSFEQAAGV GAAKSYTALA LKTISKQFRC LKDAISSQIK TTSKTLGEDN CLGVKVEGSR
401: LRYVDHQQRQ QRALQLGMIQ HNAWRPQRGL PERAVSVLRA WLFEHFLHPY PKDSDKVMLA KQTGLTRSQV SNWFINARVR LWKPMVEEMY LEEVKQEPNN
501: SSQDNNNTKG SNESSKELWS EANAAAQESG AMRFDQINIL QSKAESFKNN QTTSPTEISN SNSLQSGFHL ADMQSPNKPK STSEMHQNSP GSILSVDMEM
601: KPHHHGETNN ITREGQNNNT TTKFGIESHG GGFGAFPNME DIGRFHHHVT EQLAPRFHGN GVSLTLGLPH STENNLSLSG TTQHGFLSQN MHLGMRNSEN
701: DEFCGAINTT PPSSHSGISY ESIDIQNRKR FAAQLLRDFV A

Best Arabidopsis Sequence Match ( AT1G75410.1 )
(BLAST)

001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV

Arabidopsis Description

BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.