CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053151_P003	Maize	nucleus	88.7	91.21
Os11t0158600-00	Rice	nucleus	45.36	74.52
TraesCS4A01G200800.1	Wheat	nucleus	70.29	73.04
TraesCS4D01G111900.1	Wheat	nucleus	69.86	72.59
TraesCS4B01G114600.1	Wheat	nucleus	69.57	72.51
Os11t0158832-00	Rice	nucleus	27.54	72.24
HORVU4Hr1G020710.1	Barley	nucleus	47.39	62.88
GSMUA_Achr10P...	Banana	nucleus	31.88	52.63
GSMUA_Achr6P07130_001	Banana	nucleus	36.38	51.12
KRH26689	Soybean	nucleus	34.35	45.84
GSMUA_Achr6P18180_001	Banana	nucleus	41.59	45.27
KRH72182	Soybean	nucleus	42.75	44.43
KRH32854	Soybean	nucleus	42.17	44.02
KRH68008	Soybean	nucleus	41.45	42.12
CDY32069	Canola	nucleus	38.7	41.98
KRG96259	Soybean	nucleus	41.3	41.91
VIT_06s0009g00410.t01	Wine grape	nucleus	43.91	41.62
CDY40420	Canola	nucleus	38.12	41.61
KRH22635	Soybean	nucleus	41.45	40.74
VIT_08s0105g00230.t01	Wine grape	nucleus	36.52	40.38
CDX84171	Canola	nucleus	34.2	40.14
CDX84585	Canola	nucleus	38.99	40.09
Bra017277.1-P	Field mustard	nucleus	38.99	39.85
PGSC0003DMT400015183	Potato	nucleus	39.42	39.77
AT2G35940.3	Thale cress	nucleus	39.13	39.71
PGSC0003DMT400054945	Potato	nucleus	40.14	39.35
Solyc01g007070.2.1	Tomato	nucleus	39.86	39.29
Bra005310.1-P	Field mustard	nucleus	35.36	38.85
CDX75085	Canola	nucleus	35.36	38.85
CDX79646	Canola	nucleus	38.84	38.78
Solyc06g074120.2.1	Tomato	nucleus	39.28	38.77
PGSC0003DMT400050527	Potato	nucleus	38.55	37.68
KRH25319	Soybean	nucleus	40.29	37.52
Solyc11g068950.1.1	Tomato	nucleus	35.36	36.91
Bra023045.1-P	Field mustard	nucleus	34.64	36.6
KRG88864	Soybean	nucleus	40.29	36.39
EER92806	Sorghum	nucleus	30.43	35.59
EER91079	Sorghum	nucleus	31.88	33.9
AT2G27220.2	Thale cress	nucleus	21.16	32.52
KXG24130	Sorghum	nucleus	30.72	32.22
CDY30566	Canola	nucleus	20.87	32.14
Bra034335.1-P	Field mustard	nucleus	20.87	32.14
CDX77099	Canola	nucleus	20.72	31.85
KXG37846	Sorghum	nucleus	16.23	31.46
EER89055	Sorghum	nucleus	22.61	29.77
EER92018	Sorghum	nucleus	25.65	27.92
KXG40303	Sorghum	nucleus	24.93	27.48
EES18336	Sorghum	nucleus	21.3	25.79
EES03882	Sorghum	nucleus	21.16	24.62
EER93512	Sorghum	nucleus, plastid	26.38	23.64
KXG20197	Sorghum	nucleus	15.51	21.66
EES04785	Sorghum	nucleus	16.23	19.86

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EntrezGene:8070661	UniProt:C5Y550	ncoils:Coil	ProteinID:EES08017.2
EnsemblPlants:EES09309	ProteinID:EES09309	ProteinID:EES09309.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	ProteinID:OQU82915.1	PFAM:PF05920	PFAM:PF07526
InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF194	SMART:SM00389	SMART:SM00574
EnsemblPlantsGene:SORBI_3005G045200	SUPFAM:SSF46689	unigene:Sbi.13375	UniParc:UPI0001A86918	RefSeq:XP_002450321.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:4274728..4280346

Molecular Weight (calculated)

71665.4 Da

IEP (calculated)

6.633

GRAVY (calculated)

-0.444

Length

690 amino acids

Sequence
(BLAST)

001: MAAYYHGGAG TDIQASTDGL QTLYLMNPSY AGYADDGGAS TAPGATNMML LNSAVTTMTP ASFAHHHQQQ QSPSSAAHHQ QQQHFVGIPL QAPPSGYNLW
101: TPATVAADMS MSSPTQAQTP GGAAAGGVSA VLSLSSREAA PPPVTVAAVA GPGCTDEAGK YHLGVSATSQ GQMVMSSKYL KAAQELLDEV VSVSKGVEDA
201: NKTTTKSLAA VKKKEDSEGV SGGGTEDGSG AKSGGSGAAE MSTAERQELQ MKKSKLINML DEVEQRYRQY HGQMQAVSSS FEAAAGAGSA RTYTALALRT
301: ISRQFRCLRD AIASQVRAAS RALGEDADAA VAAGGRTVGS RLRYIDHQLR QQRALQQLGM MQGGAWRPQR GLPERSVSIL RAWLFEHFLH PYPKDSDKIM
401: LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYLEETKDQD GGGNDEGKSG GGGSKSGDTV DGVTPRADAM SSKSAVVRVG GGGGAAESAS TNKGIHGSSL
501: LELGGGGDHQ QSHAGFYDDD EDDGDDAMGR RLKKARGDEP PAPAFHHVHD MAALHAQAAA AARQQHEEVS HRELLMKFME SGGGGGAGAR DHHHHHDGGG
601: YSLFAPGPYG QFAAEPAAFA FAGNGGVSLT LGLPHGAAGG SAAEQTASFL MGSTTAGADS GSHGAGAGGY DMNMQSTKSF AAQLMRDFVA

Best Arabidopsis Sequence Match ( AT2G35940.3 )
(BLAST)

001: MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQQDND SNNNNNSNNS NNNNTNTNTN NNNSSFVFLD SHAPQPNASQ QFVGIPLSGH EAASITAADN
101: ISVLHGYPPR VQYSLYGSHQ VDPTHQQAAC ETPRAQQGLS LTLSSQQQQQ QQHHQQHQPI HVGFGSGHGE DIRVGSGSTG SGVTNGIANL VSSKYLKAAQ
201: ELLDEVVNAD SDDMNAKSQL FSSKKGSCGN DKPVGESSAG AGGEGSGGGA EAAGKRPVEL GTAERQEIQM KKAKLSNMLH EVEQRYRQYH QQMQMVISSF
301: EQAAGIGSAK SYTSLALKTI SRQFRCLKEA IAGQIKAANK SLGEEDSVSG VGRFEGSRLK FVDHHLRQQR ALQQLGMIQH PSNNAWRPQR GLPERAVSVL
401: RAWLFEHFLH PYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYMEEMKEQA KNMGSMEKTP LDQSNEDSAS KSTSNQEKSP MADTNYHMNP
501: NHNGDLEGVT GMQGSPKRLR TSDETMMQPI NADFSSNEKL TMKILEERQG IRSDGGYPFM GNFGQYQMDE MSRFDVVSDQ ELMAQRYSGN NNGVSLTLGL
601: PHCDSLSSTH HQGFMQTHHG IPIGRRVKIG ETEEYGPATI NGGSSTTTAH SSAAAAAAYN GMNIQNQKRY VAQLLPDFVA

Arabidopsis Description

BLH1BEL1-like homeodomain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.