Factsheet for GSMUA_Achr6P18180_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	53.47	81.1
GSMUA_Achr6P07130_001	Banana	nucleus	48.42	62.53
GSMUA_Achr5P03140_001	Banana	nucleus	5.99	49.35
Os11t0158600-00	Rice	nucleus	30.44	45.95
GSMUA_Achr1P23300_001	Banana	extracellular	30.76	45.14
Zm00001d053151_P003	Maize	nucleus	44.95	42.47
TraesCS4B01G114600.1	Wheat	nucleus	43.69	41.84
GSMUA_Achr11P...	Banana	plastid	17.35	41.83
GSMUA_Achr4P14670_001	Banana	nucleus	19.56	41.75
EES09309	Sorghum	nucleus	45.27	41.59
TraesCS4A01G200800.1	Wheat	nucleus	43.22	41.27
TraesCS4D01G111900.1	Wheat	nucleus	43.22	41.27
HORVU4Hr1G020710.1	Barley	nucleus	33.75	41.15
GSMUA_Achr4P07450_001	Banana	nucleus	19.24	40.26
Os11t0158832-00	Rice	nucleus	16.4	39.54
GSMUA_Achr9P21580_001	Banana	nucleus	33.91	39.38
GSMUA_Achr5P08840_001	Banana	nucleus	19.56	39.12
GSMUA_Achr1P03680_001	Banana	nucleus	17.98	38.51
GSMUA_Achr3P29230_001	Banana	nucleus	27.44	38.5
GSMUA_Achr10P...	Banana	nucleus	6.15	38.24
GSMUA_Achr1P26900_001	Banana	nucleus	23.82	37.94
GSMUA_Achr2P06410_001	Banana	nucleus	8.68	37.93
GSMUA_Achr4P13590_001	Banana	nucleus	32.18	35.85
GSMUA_Achr4P12180_001	Banana	nucleus	28.55	34.61
GSMUA_Achr5P03130_001	Banana	cytosol	18.14	34.43
GSMUA_Achr4P06630_001	Banana	nucleus	29.97	33.57
GSMUA_Achr4P04480_001	Banana	nucleus	21.92	33.02
GSMUA_Achr1P06400_001	Banana	nucleus	25.24	31.01
GSMUA_Achr7P14960_001	Banana	nucleus	20.35	29.32
GSMUA_Achr2P04310_001	Banana	nucleus	25.55	29.03
GSMUA_Achr9P18740_001	Banana	nucleus	25.55	28.12
GSMUA_Achr10P...	Banana	plastid	4.26	27.84
GSMUA_Achr2P06420_001	Banana	nucleus	15.62	26.83
GSMUA_Achr7P27440_001	Banana	nucleus	27.6	25.58
GSMUA_Achr5P07020_001	Banana	nucleus	20.35	24.57
GSMUA_AchrUn_...	Banana	nucleus	20.19	21.59
GSMUA_Achr10P...	Banana	nucleus	24.29	20.42
GSMUA_Achr4P02680_001	Banana	nucleus	18.45	20.21
GSMUA_Achr2P19430_001	Banana	nucleus	17.03	19.96
GSMUA_Achr11P...	Banana	plastid	9.15	14.22

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G18180_001
EnsemblPlants:GSMUA_Achr6P18180_001	EnsemblPlants:GSMUA_Achr6T18180_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
UniProt:M0T816	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF135	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000295212D	SEG:seg

Description

Putative BEL1-like homeodomain protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G18180_001]

Coordinates

chr6:+:12240480..12243247

Molecular Weight (calculated)

68971.8 Da

IEP (calculated)

7.267

GRAVY (calculated)

-0.586

Length

634 amino acids

Sequence
(BLAST)

001: MATYFHGAPE IQPDGLQTLY LMNPSYVGYS DAAAPANMVL LNSTLNSMNP INLAQASQPN HHQQQQFVGI PLQTAAQPHE SYRPPPIHAP HDLSAAQGLS
101: LSLSPHDMVA PAPEITPASA NGATTVASAS MMPGAANGAS GSQSFLMGSK YLKAAQQLLD EVVNVEKGIK SEPAKGATSK DPADSSNAEL KCLGAGATDD
201: NSKEKQVADL TTAERQELQM KKAKLINMLD EVEQRYRQYH HQMQIVISSF EAVAGYGSAR TYTALALRTI SKQFRCLRDA ITGQIQATSK SLGEEESKSG
301: GSRLRFIDHH LRQQRALQQL GMIQPNAWRP QRGLPERSVS VLRAWLFEHF LHPYPKDSDK MMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEIKD
401: QEQNNSDENA SKSDAHGSST SKSNAPQEGS PTATPPSDSL KNDLKQTLAS VQPSSFVHGQ NQAYYDRDAI AQPRVKKARS NDSPHVNPMA NPLTVGSKPD
501: ETSNHEILMQ LMDGRQGVGE QGYPLLAGTT SHGGNYGAYP MGELRTFDAE HFSRRFSGNG VSLTLGLQHS GNLPLSGAQA SLLSSDSMRL GRRLETSSEG
601: SDYCSLNHNT AAAHSSNAAF RADRGLLLNY YQAS

Best Arabidopsis Sequence Match ( AT2G35940.3 )
(BLAST)

001: MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQQDND SNNNNNSNNS NNNNTNTNTN NNNSSFVFLD SHAPQPNASQ QFVGIPLSGH EAASITAADN
101: ISVLHGYPPR VQYSLYGSHQ VDPTHQQAAC ETPRAQQGLS LTLSSQQQQQ QQHHQQHQPI HVGFGSGHGE DIRVGSGSTG SGVTNGIANL VSSKYLKAAQ
201: ELLDEVVNAD SDDMNAKSQL FSSKKGSCGN DKPVGESSAG AGGEGSGGGA EAAGKRPVEL GTAERQEIQM KKAKLSNMLH EVEQRYRQYH QQMQMVISSF
301: EQAAGIGSAK SYTSLALKTI SRQFRCLKEA IAGQIKAANK SLGEEDSVSG VGRFEGSRLK FVDHHLRQQR ALQQLGMIQH PSNNAWRPQR GLPERAVSVL
401: RAWLFEHFLH PYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYMEEMKEQA KNMGSMEKTP LDQSNEDSAS KSTSNQEKSP MADTNYHMNP
501: NHNGDLEGVT GMQGSPKRLR TSDETMMQPI NADFSSNEKL TMKILEERQG IRSDGGYPFM GNFGQYQMDE MSRFDVVSDQ ELMAQRYSGN NNGVSLTLGL
601: PHCDSLSSTH HQGFMQTHHG IPIGRRVKIG ETEEYGPATI NGGSSTTTAH SSAAAAAAYN GMNIQNQKRY VAQLLPDFVA

Arabidopsis Description

BLH1BEL1-like homeodomain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.