Factsheet for GSMUA_Achr9P18740_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P03660_001
GSMUA_Achr1P09570_001
GSMUA_Achr1P19120_001
GSMUA_Achr2P09660_001
GSMUA_Achr2P13200_001
GSMUA_Achr3P09850_001
GSMUA_Achr3P12130_001
GSMUA_Achr3P13490_001
GSMUA_Achr3P26230_001
GSMUA_Achr4P03120_001
GSMUA_Achr4P28270_001
GSMUA_Achr4P32230_001
GSMUA_Achr5P01960_001
GSMUA_Achr6P04640_001
GSMUA_Achr6P31770_001
GSMUA_Achr7P08050_001
GSMUA_Achr7P27540_001
GSMUA_Achr9P05640_001
GSMUA_Achr9P09770_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	GSMUA_Achr3P09850_001	AT1G06920.1	15781858
AT5G41410.1	GSMUA_Achr1P09570_001	AT1G26260.1	15781858
AT5G41410.1	GSMUA_Achr1P19120_001	AT1G26260.1	15781858
AT5G41410.1	GSMUA_Achr2P09660_001	AT1G26260.1	15781858
AT5G41410.1	GSMUA_Achr3P12130_001	AT1G26260.1	15781858
AT5G41410.1	GSMUA_Achr3P13490_001	AT1G26260.1	15781858
AT5G41410.1	GSMUA_Achr9P09770_001	AT1G26260.1	15781858
AT5G41410.1	GSMUA_Achr1P03660_001	AT1G62990.1	11701881
AT5G41410.1	GSMUA_Achr10P...	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr2P13200_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr3P26230_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr4P03120_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr4P28270_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr4P32230_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr5P01960_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr6P04640_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr7P08050_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr7P27540_001	AT4G08150.1	11701881
AT5G41410.1	GSMUA_Achr10P...	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr2P13200_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr3P26230_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr4P03120_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr4P28270_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr4P32230_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr5P01960_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr6P04640_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr7P08050_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr7P27540_001	AT4G08150.1	15781858
AT5G41410.1	GSMUA_Achr10P...	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr2P13200_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr3P26230_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr4P03120_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr4P28270_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr4P32230_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr5P01960_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr6P04640_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr7P08050_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr7P27540_001	AT4G08150.1	17873098
AT5G41410.1	GSMUA_Achr6P31770_001	AT4G18830.1	15781858
AT5G41410.1	GSMUA_Achr9P05640_001	AT4G18830.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P03680_001	Banana	nucleus	37.67	73.31
GSMUA_Achr5P03140_001	Banana	nucleus	7.12	53.25
GSMUA_Achr1P06400_001	Banana	nucleus	40.62	45.35
CDY45383	Canola	nucleus	20.66	45.25
VIT_02s0025g00200.t01	Wine grape	nucleus	49.83	44.43
GSMUA_Achr2P04310_001	Banana	nucleus	42.71	44.09
GSMUA_Achr4P04480_001	Banana	nucleus	31.94	43.71
KRH27902	Soybean	nucleus	48.26	43.3
KRH77572	Soybean	nucleus	47.92	42.72
KRH59951	Soybean	nucleus	45.49	41.26
KRH41225	Soybean	nucleus	45.66	40.71
GSMUA_Achr10P...	Banana	nucleus	7.12	40.2
PGSC0003DMT400032122	Potato	nucleus	44.1	40.13
Solyc08g081400.2.1	Tomato	nucleus	44.27	39.6
GSMUA_Achr5P08840_001	Banana	nucleus	20.66	37.54
GSMUA_Achr11P...	Banana	plastid	17.01	37.26
GSMUA_Achr2P06410_001	Banana	nucleus	9.38	37.24
GSMUA_Achr4P14670_001	Banana	nucleus	19.1	37.04
GSMUA_Achr4P07450_001	Banana	nucleus	19.27	36.63
GSMUA_Achr4P12180_001	Banana	nucleus	33.16	36.52
GSMUA_Achr1P26900_001	Banana	nucleus	25.0	36.18
GSMUA_Achr1P23300_001	Banana	extracellular	25.87	34.49
Bra025497.1-P	Field mustard	nucleus	34.72	33.73
AT5G41410.1	Thale cress	nucleus	35.59	33.55
CDY44476	Canola	nucleus	32.99	33.45
GSMUA_Achr10P...	Banana	nucleus	23.44	32.3
GSMUA_Achr6P07130_001	Banana	nucleus	25.17	29.53
GSMUA_Achr9P21580_001	Banana	nucleus	27.78	29.3
GSMUA_Achr3P29230_001	Banana	nucleus	22.92	29.2
GSMUA_Achr4P13590_001	Banana	nucleus	27.78	28.12
GSMUA_Achr10P...	Banana	plastid	4.69	27.84
GSMUA_Achr7P14960_001	Banana	nucleus	20.31	26.59
GSMUA_Achr5P03130_001	Banana	cytosol	14.93	25.75
GSMUA_Achr4P06630_001	Banana	nucleus	25.17	25.62
GSMUA_Achr6P18180_001	Banana	nucleus	28.12	25.55
GSMUA_Achr7P27440_001	Banana	nucleus	29.34	24.71
GSMUA_Achr2P06420_001	Banana	nucleus	15.1	23.58
GSMUA_Achr5P07020_001	Banana	nucleus	21.01	23.05
GSMUA_Achr10P...	Banana	nucleus	23.44	17.9
GSMUA_AchrUn_...	Banana	nucleus	18.06	17.54
GSMUA_Achr2P19430_001	Banana	nucleus	16.32	17.38
GSMUA_Achr4P02680_001	Banana	nucleus	16.67	16.58
GSMUA_Achr11P...	Banana	plastid	9.38	13.24

Protein Annotations

MapMan:15.5.3.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G18740_001	EnsemblPlants:GSMUA_Achr9P18740_001
EnsemblPlants:GSMUA_Achr9T18740_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0U1I1
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PANTHER:PTHR11850	PANTHER:PTHR11850:SF66	SMART:SM00389
SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002956A1C	SEG:seg	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G18740_001]

Coordinates

chr9:-:14211164..14214124

Molecular Weight (calculated)

64856.4 Da

IEP (calculated)

7.497

GRAVY (calculated)

-0.584

Length

576 amino acids

Sequence
(BLAST)

001: MSHHHQTMGY TNFSSTIEPV MQSFQPSQEL YSLQTGMEML GIPCKPQENS DNWRASFSVI GSSAHAASCS FPQPSNENLM VTPERLPLCP WQPPNQMLVD
101: GPRARFLFPP CEGNGQSSSG GLSLSLNHAE TSNSSYDQPP FDQDVLPTSR DELFQDGRFF RPPISPTTSN LHQPSQHLLK TSKYLLAAQD LLNEFCNMNT
201: TADSGSSKKK ASKTKQRNEG GSSSSTSLSQ SLYSLDIHEL QTRKAKLLSM REEVDRRYRR YRHRMKAVVS SFEAMAGEGA AAAYSTLASK VMSRHFGCLR
301: DRIAGQIQAI RRQMGEKDAQ KAFQQAGVME SEPWRPQRGL PQRSVSILRA WLFEHFLHPY PSDVDKHILA RQTGLSRSQA CLRPTLYNHI QIIRLLAITV
401: ISHMITRIIY MWFYQQVSNW FINARVRLWK PMVEEMYLEE ILEQEDQTSL GDNSNDDDAI NPPNHPHSSS ARDRISSKSS DFGAVDLDFS SYNHYYCSNQ
501: NFGSGVSLTL GLQQHNGGGS VRPSFPPSLA SQQSLVYSKE QMEECHPSQF SILDGEAQNL HYRNLMGAQL LRDLAG

Best Arabidopsis Sequence Match ( AT2G16400.1 )
(BLAST)

001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA

Arabidopsis Description

BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.