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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P09170_001 Banana nucleus 17.29 49.59
GSMUA_Achr6P16480_001 Banana nucleus 20.17 42.68
GSMUA_Achr3P12130_001 Banana nucleus 40.35 36.75
GSMUA_Achr10P... Banana nucleus 18.44 34.78
GSMUA_Achr5P24960_001 Banana nucleus 18.16 34.24
GSMUA_Achr9P18510_001 Banana nucleus 30.55 33.97
GSMUA_Achr9P28060_001 Banana nucleus 29.68 33.66
GSMUA_Achr3P13490_001 Banana nucleus 42.07 33.49
GSMUA_Achr1P27010_001 Banana nucleus 21.33 32.74
GSMUA_Achr1P19120_001 Banana nucleus 40.06 32.4
GSMUA_Achr6P36210_001 Banana nucleus 25.65 32.36
GSMUA_AchrUn_... Banana nucleus 21.61 30.99
GSMUA_Achr9P11020_001 Banana nucleus 22.48 30.23
GSMUA_AchrUn_... Banana nucleus 22.77 27.92
AT1G26260.1 Thale cress nucleus 30.55 27.18
GSMUA_Achr2P09660_001 Banana nucleus 24.78 27.13
GSMUA_Achr3P10600_001 Banana nucleus 35.45 26.68
GSMUA_Achr9P01040_001 Banana nucleus 21.61 26.6
GSMUA_Achr9P07330_001 Banana nucleus 27.67 26.52
GSMUA_Achr10P... Banana nucleus 21.04 26.35
GSMUA_Achr8P24490_001 Banana nucleus 31.12 26.09
GSMUA_Achr9P09770_001 Banana nucleus 23.63 25.71
GSMUA_Achr6P09050_001 Banana nucleus 22.48 24.68
GSMUA_Achr7P01750_001 Banana nucleus 23.05 23.81
GSMUA_Achr1P19610_001 Banana nucleus 24.5 23.29
GSMUA_Achr3P02490_001 Banana nucleus 27.38 22.51
GSMUA_Achr4P17570_001 Banana golgi, vacuole 23.34 22.07
GSMUA_Achr4P19330_001 Banana nucleus 24.5 21.96
GSMUA_Achr7P06330_001 Banana nucleus 23.05 21.86
GSMUA_Achr2P21280_001 Banana nucleus 31.12 21.47
GSMUA_Achr9P22300_001 Banana nucleus 17.58 21.03
GSMUA_Achr6P27780_001 Banana nucleus 31.41 20.88
GSMUA_Achr10P... Banana nucleus 23.92 20.65
GSMUA_Achr10P... Banana nucleus 25.07 20.57
GSMUA_Achr7P22770_001 Banana nucleus 25.36 19.91
GSMUA_Achr2P06090_001 Banana nucleus 26.51 19.25
GSMUA_Achr4P16120_001 Banana nucleus 25.07 19.04
GSMUA_Achr2P21460_001 Banana nucleus 21.04 18.86
GSMUA_Achr7P02770_001 Banana nucleus 25.94 18.44
GSMUA_Achr3P17290_001 Banana plastid 29.68 18.07
GSMUA_Achr10P... Banana mitochondrion 29.39 15.5
Protein Annotations
EnsemblPlants:GSMUA_Achr1P09570_001EnsemblPlants:GSMUA_Achr1T09570_001EnsemblPlantsGene:GSMUA_Achr1G09570_001Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:bHLH_dom
ncoils:CoilPANTHER:PTHR12565PANTHER:PTHR12565:SF184PFAM:PF00010PFscan:PS50888SMART:SM00353
SUPFAM:SSF47459UniParc:UPI000294FAC0UniProt:M0RYG6MapMan:15.5.32MapMan:26.1.2.1.2:
Description
Putative Transcription factor bHLH49 [Source:GMGC_GENE;Acc:GSMUA_Achr1G09570_001]
Coordinates
chr1:-:7323824..7325122
Molecular Weight (calculated)
37609.8 Da
IEP (calculated)
9.466
GRAVY (calculated)
-0.356
Length
347 amino acids
Sequence
(BLAST)
001: MASDENLTTS FVNRIPIGKP VVMSARGLFF PADSAFVERA AMFSHAGGHF SGIINSLASS QPVVAPSCAD ISRDVIGSQL QKITLTVSEA KDASLPLPLD
101: HESTSGSPIK NQRNKASAHL TGGSQETRTG SAGAPGESCP SDLGAKKRKP IDPVSRSLFG SAVPTLVIIH EHHLLQDKER GERARRWPRS SSRNAAEGIE
201: AKQKQEPKHV DDGSEMPKED YVHVRARRGQ ATNSHSIAER LRRERISERM KYLQNLVPGC SKVTGKAVML DEIINYVQSL QQQVEFLSMK LAAVNAQHNY
301: GMEELVAKEV RDISLSLQAG IVSSSSAKRL AVIGACFCLS STDAFLR
Best Arabidopsis Sequence Match ( AT1G68920.1 )
(BLAST)
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.