Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P09170_001 | Banana | nucleus | 17.29 | 49.59 |
GSMUA_Achr6P16480_001 | Banana | nucleus | 20.17 | 42.68 |
GSMUA_Achr3P12130_001 | Banana | nucleus | 40.35 | 36.75 |
GSMUA_Achr10P... | Banana | nucleus | 18.44 | 34.78 |
GSMUA_Achr5P24960_001 | Banana | nucleus | 18.16 | 34.24 |
GSMUA_Achr9P18510_001 | Banana | nucleus | 30.55 | 33.97 |
GSMUA_Achr9P28060_001 | Banana | nucleus | 29.68 | 33.66 |
GSMUA_Achr3P13490_001 | Banana | nucleus | 42.07 | 33.49 |
GSMUA_Achr1P27010_001 | Banana | nucleus | 21.33 | 32.74 |
GSMUA_Achr1P19120_001 | Banana | nucleus | 40.06 | 32.4 |
GSMUA_Achr6P36210_001 | Banana | nucleus | 25.65 | 32.36 |
GSMUA_AchrUn_... | Banana | nucleus | 21.61 | 30.99 |
GSMUA_Achr9P11020_001 | Banana | nucleus | 22.48 | 30.23 |
GSMUA_AchrUn_... | Banana | nucleus | 22.77 | 27.92 |
AT1G26260.1 | Thale cress | nucleus | 30.55 | 27.18 |
GSMUA_Achr2P09660_001 | Banana | nucleus | 24.78 | 27.13 |
GSMUA_Achr3P10600_001 | Banana | nucleus | 35.45 | 26.68 |
GSMUA_Achr9P01040_001 | Banana | nucleus | 21.61 | 26.6 |
GSMUA_Achr9P07330_001 | Banana | nucleus | 27.67 | 26.52 |
GSMUA_Achr10P... | Banana | nucleus | 21.04 | 26.35 |
GSMUA_Achr8P24490_001 | Banana | nucleus | 31.12 | 26.09 |
GSMUA_Achr9P09770_001 | Banana | nucleus | 23.63 | 25.71 |
GSMUA_Achr6P09050_001 | Banana | nucleus | 22.48 | 24.68 |
GSMUA_Achr7P01750_001 | Banana | nucleus | 23.05 | 23.81 |
GSMUA_Achr1P19610_001 | Banana | nucleus | 24.5 | 23.29 |
GSMUA_Achr3P02490_001 | Banana | nucleus | 27.38 | 22.51 |
GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 23.34 | 22.07 |
GSMUA_Achr4P19330_001 | Banana | nucleus | 24.5 | 21.96 |
GSMUA_Achr7P06330_001 | Banana | nucleus | 23.05 | 21.86 |
GSMUA_Achr2P21280_001 | Banana | nucleus | 31.12 | 21.47 |
GSMUA_Achr9P22300_001 | Banana | nucleus | 17.58 | 21.03 |
GSMUA_Achr6P27780_001 | Banana | nucleus | 31.41 | 20.88 |
GSMUA_Achr10P... | Banana | nucleus | 23.92 | 20.65 |
GSMUA_Achr10P... | Banana | nucleus | 25.07 | 20.57 |
GSMUA_Achr7P22770_001 | Banana | nucleus | 25.36 | 19.91 |
GSMUA_Achr2P06090_001 | Banana | nucleus | 26.51 | 19.25 |
GSMUA_Achr4P16120_001 | Banana | nucleus | 25.07 | 19.04 |
GSMUA_Achr2P21460_001 | Banana | nucleus | 21.04 | 18.86 |
GSMUA_Achr7P02770_001 | Banana | nucleus | 25.94 | 18.44 |
GSMUA_Achr3P17290_001 | Banana | plastid | 29.68 | 18.07 |
GSMUA_Achr10P... | Banana | mitochondrion | 29.39 | 15.5 |
Protein Annotations
EnsemblPlants:GSMUA_Achr1P09570_001 | EnsemblPlants:GSMUA_Achr1T09570_001 | EnsemblPlantsGene:GSMUA_Achr1G09570_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
ncoils:Coil | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 |
SUPFAM:SSF47459 | UniParc:UPI000294FAC0 | UniProt:M0RYG6 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Putative Transcription factor bHLH49 [Source:GMGC_GENE;Acc:GSMUA_Achr1G09570_001]
Coordinates
chr1:-:7323824..7325122
Molecular Weight (calculated)
37609.8 Da
IEP (calculated)
9.466
GRAVY (calculated)
-0.356
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDENLTTS FVNRIPIGKP VVMSARGLFF PADSAFVERA AMFSHAGGHF SGIINSLASS QPVVAPSCAD ISRDVIGSQL QKITLTVSEA KDASLPLPLD
101: HESTSGSPIK NQRNKASAHL TGGSQETRTG SAGAPGESCP SDLGAKKRKP IDPVSRSLFG SAVPTLVIIH EHHLLQDKER GERARRWPRS SSRNAAEGIE
201: AKQKQEPKHV DDGSEMPKED YVHVRARRGQ ATNSHSIAER LRRERISERM KYLQNLVPGC SKVTGKAVML DEIINYVQSL QQQVEFLSMK LAAVNAQHNY
301: GMEELVAKEV RDISLSLQAG IVSSSSAKRL AVIGACFCLS STDAFLR
101: HESTSGSPIK NQRNKASAHL TGGSQETRTG SAGAPGESCP SDLGAKKRKP IDPVSRSLFG SAVPTLVIIH EHHLLQDKER GERARRWPRS SSRNAAEGIE
201: AKQKQEPKHV DDGSEMPKED YVHVRARRGQ ATNSHSIAER LRRERISERM KYLQNLVPGC SKVTGKAVML DEIINYVQSL QQQVEFLSMK LAAVNAQHNY
301: GMEELVAKEV RDISLSLQAG IVSSSSAKRL AVIGACFCLS STDAFLR
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.