Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g113560.2.1 | Tomato | cytosol | 26.74 | 67.65 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 51.55 | 64.25 |
| Os03t0802900-01 | Rice | nucleus | 63.18 | 61.51 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 49.22 | 61.06 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 58.53 | 59.92 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 58.91 | 59.84 |
| Zm00001d007768_P001 | Maize | nucleus | 55.81 | 57.37 |
| Zm00001d034503_P002 | Maize | nucleus | 56.2 | 56.86 |
| EER90712 | Sorghum | nucleus | 55.04 | 56.13 |
| Solyc04g005130.2.1 | Tomato | nucleus | 48.06 | 54.63 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 70.16 | 53.87 |
| PGSC0003DMT400004855 | Potato | nucleus | 46.12 | 53.85 |
| KRH69415 | Soybean | nucleus | 53.1 | 52.69 |
| KRH74729 | Soybean | nucleus | 53.88 | 52.65 |
| KRH69414 | Soybean | nucleus | 51.94 | 52.55 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 57.36 | 52.11 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 55.81 | 51.99 |
| KRH63442 | Soybean | nucleus | 48.84 | 51.85 |
| KRH56987 | Soybean | plastid | 44.96 | 51.79 |
| KRH45811 | Soybean | nucleus | 54.65 | 51.65 |
| KRH03393 | Soybean | nucleus | 45.35 | 51.09 |
| PGSC0003DMT400062844 | Potato | nucleus | 55.43 | 49.14 |
| KRH54478 | Soybean | nucleus | 51.16 | 49.07 |
| PGSC0003DMT400058204 | Potato | nucleus | 51.16 | 48.89 |
| Solyc05g006650.2.1 | Tomato | nucleus | 50.78 | 48.16 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 22.48 | 47.93 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 67.83 | 47.68 |
| CDY37979 | Canola | nucleus | 47.67 | 46.24 |
| CDX93427 | Canola | nucleus | 46.51 | 44.78 |
| Bra019935.1-P | Field mustard | nucleus | 46.51 | 44.78 |
| CDX87255 | Canola | nucleus, plastid | 48.45 | 44.64 |
| AT5G62610.2 | Thale cress | nucleus | 47.67 | 43.77 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 25.97 | 40.85 |
| CDY61420 | Canola | extracellular | 20.93 | 39.71 |
| GSMUA_Achr10P... | Banana | nucleus | 24.81 | 34.78 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 24.81 | 34.78 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 27.91 | 31.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.84 | 31.82 |
| AT1G59640.2 | Thale cress | nucleus | 42.25 | 31.78 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 31.4 | 29.45 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 31.78 | 29.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.62 | 27.92 |
| GSMUA_Achr10P... | Banana | nucleus | 27.91 | 25.99 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 31.78 | 25.87 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 30.23 | 24.68 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 29.46 | 24.36 |
| GSMUA_Achr10P... | Banana | nucleus | 38.37 | 23.4 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 27.52 | 23.2 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 33.72 | 22.83 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 31.78 | 22.65 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 27.91 | 22.57 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 30.23 | 22.48 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 37.98 | 22.17 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 36.05 | 22.04 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 34.88 | 21.74 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 24.42 | 21.72 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 37.98 | 21.44 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 39.92 | 21.11 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 29.46 | 20.77 |
| GSMUA_Achr10P... | Banana | nucleus | 32.17 | 20.65 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 41.09 | 20.31 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 28.68 | 20.27 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 32.95 | 19.81 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 33.33 | 19.72 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 34.88 | 19.52 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 37.98 | 19.48 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 29.07 | 19.38 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 28.68 | 19.12 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 34.11 | 18.41 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 35.66 | 16.14 |
| GSMUA_Achr10P... | Banana | mitochondrion | 36.82 | 14.44 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P11020_001 | EnsemblPlants:GSMUA_Achr9T11020_001 | EnsemblPlantsGene:GSMUA_Achr9G11020_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF305 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002961AB3 | UniProt:M0TZB1 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Transcription factor bHLH79 [Source:GMGC_GENE;Acc:GSMUA_Achr9G11020_001]
Coordinates
chr9:-:7155799..7158956
Molecular Weight (calculated)
28031.0 Da
IEP (calculated)
7.275
GRAVY (calculated)
-0.617
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRASLSSLG PEMCPFPMVG APPPLGPVIR RLGGGAPAEE SAVTDQSGRN SKGRRRKRDS VASDDESSKL ASTSGGQGLM DNETKRLKAM HTNEIGSIKT
101: EVEASSGNGN KIIDQNPGTS EPPKHDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI GKASILDEII NYIQALQHQV EFLSMKLEAV
201: TSHVNSGFEF FPHKDFGAQA YDTASSLPFS SQAAREYEQG SATEWLHMQV GGALERVT
101: EVEASSGNGN KIIDQNPGTS EPPKHDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI GKASILDEII NYIQALQHQV EFLSMKLEAV
201: TSHVNSGFEF FPHKDFGAQA YDTASSLPFS SQAAREYEQG SATEWLHMQV GGALERVT
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.