CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03393	Soybean	nucleus	87.95	86.03
KRH63442	Soybean	nucleus	66.07	60.91
KRH54478	Soybean	nucleus	68.3	56.88
PGSC0003DMT400004855	Potato	nucleus	53.12	53.85
Os07t0193800-01	Rice	endoplasmic reticulum	49.11	52.88
Solyc04g005130.2.1	Tomato	nucleus	53.57	52.86
HORVU5Hr1G107520.2	Barley	cytosol, nucleus	47.77	51.69
KRH69414	Soybean	nucleus	56.25	49.41
KRH74729	Soybean	nucleus	56.25	47.73
KRH45811	Soybean	nucleus	57.14	46.89
KRH69415	Soybean	nucleus	54.02	46.54
GSMUA_Achr9P11020_001	Banana	nucleus	51.79	44.96
Os03t0802900-01	Rice	nucleus	53.12	44.91
TraesCS5D01G459800.1	Wheat	nucleus, plastid	50.45	44.84
Zm00001d034503_P002	Maize	nucleus	50.89	44.71
TraesCS5B01G457600.1	Wheat	nucleus, plastid	50.45	44.49
CDX87255	Canola	nucleus, plastid	54.91	43.93
EER90712	Sorghum	nucleus	49.55	43.87
AT5G62610.2	Thale cress	nucleus	54.91	43.77
Zm00001d007768_P001	Maize	nucleus	46.43	41.43
GSMUA_Achr7P01750_001	Banana	nucleus	54.91	36.61
GSMUA_Achr4P17570_001	Banana	golgi, vacuole	53.12	32.43
KRH54121	Soybean	nucleus	37.5	24.07
KRH63842	Soybean	nucleus	37.05	23.99
KRH41084	Soybean	nucleus	35.71	23.6
KRH52141	Soybean	nucleus	30.8	23.08
KRH51523	Soybean	nucleus	39.29	22.56
KRH59766	Soybean	nucleus	34.38	22.51
KRG95332	Soybean	nucleus	35.71	21.86
KRH71879	Soybean	nucleus	33.93	21.47
KRH33022	Soybean	nucleus	33.93	21.29
KRH29448	Soybean	nucleus	38.84	20.67
KRH60839	Soybean	nucleus	38.84	20.23
KRH61450	Soybean	nucleus	33.93	20.21
KRH24463	Soybean	nucleus	36.16	20.05
KRH15460	Soybean	nucleus	37.5	19.58
KRG88634	Soybean	nucleus, plastid	37.5	19.31
KRH67006	Soybean	nucleus	34.38	19.25
KRH07417	Soybean	nucleus, plastid	45.09	17.15
KRH66158	Soybean	nucleus, plastid	44.64	16.84
KRG99606	Soybean	nucleus	43.3	16.72
KRH46615	Soybean	nucleus	43.75	16.72
KRH75189	Soybean	nucleus	38.84	15.82
KRH71031	Soybean	nucleus	37.95	15.43

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02002805	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G031800
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	UniProt:I1JZU4
InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH56987	ProteinID:KRH56987	ProteinID:KRH56987.1	PFAM:PF00010
PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002339F7E
InterPro:bHLH_dom	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2760249..2763974

Molecular Weight (calculated)

24693.3 Da

IEP (calculated)

9.504

GRAVY (calculated)

-0.576

Length

224 amino acids

Sequence
(BLAST)

001: MEPLLFNDST FSSANPSLSE IWPSHFPSDH TPRKRRLSPS SDSASNKHIK LSAPESQDQN GALKVGEVDA TSVAGNKLPQ QTPKPSSSEQ APKQDYIHVR
101: ARRGQATDNH SLAERARREK ISERMKILQD LVPGCNKVIG KAFVLDEIIN YVQSLQRQVE FLSMKLEAVS SRLSMKPTLE CFPSKEVCTQ AGIIFGSQPA
201: KGYAQGSQMG WLHMQIAGGF EKAT

Best Arabidopsis Sequence Match ( AT1G59640.1 )
(BLAST)

001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS

Arabidopsis Description

BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.