CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99606	Soybean	nucleus	90.27	91.21
KRH07417	Soybean	nucleus, plastid	71.84	71.48
KRH66158	Soybean	nucleus, plastid	72.01	71.04
AT3G07340.1	Thale cress	nucleus	40.61	52.19
Bra029640.1-P	Field mustard	nucleus, plastid	38.23	50.45
CDY35923	Canola	nucleus, plastid	37.88	49.55
CDY51061	Canola	nucleus	36.52	49.42
CDY28061	Canola	nucleus	38.05	49.23
Bra020691.1-P	Field mustard	nucleus	37.2	48.99
CDY05670	Canola	nucleus	21.5	48.84
AT5G48560.1	Thale cress	nucleus	41.47	48.8
CDX86297	Canola	nucleus	40.61	48.57
CDX85347	Canola	nucleus	40.61	48.47
Bra037478.1-P	Field mustard	nucleus	40.27	48.16
CDX86296	Canola	nucleus	22.18	47.97
KRH45811	Soybean	nucleus	20.82	44.69
KRH03393	Soybean	nucleus	17.24	44.1
KRH56987	Soybean	plastid	16.72	43.75
KRH63442	Soybean	nucleus	17.92	43.21
KRH69414	Soybean	nucleus	18.43	42.35
KRH69415	Soybean	nucleus	18.43	41.54
KRH74729	Soybean	nucleus	18.26	40.53
KRH54478	Soybean	nucleus	18.09	39.41
KRH24463	Soybean	nucleus	24.57	35.64
KRH29448	Soybean	nucleus	24.4	33.97
KRH51523	Soybean	nucleus	22.18	33.33
KRH52141	Soybean	nucleus	16.72	32.78
KRH63842	Soybean	nucleus	18.77	31.79
KRH54121	Soybean	nucleus	18.26	30.66
KRH41084	Soybean	nucleus	17.58	30.38
KRH71879	Soybean	nucleus	18.26	30.23
KRH60839	Soybean	nucleus	21.84	29.77
KRH59766	Soybean	nucleus	17.24	29.53
KRH61450	Soybean	nucleus	18.94	29.52
KRG95332	Soybean	nucleus	18.43	29.51
KRH33022	Soybean	nucleus	17.92	29.41
KRH15460	Soybean	nucleus	21.5	29.37
KRH75189	Soybean	nucleus	27.3	29.09
KRG88634	Soybean	nucleus, plastid	21.33	28.74
KRH71031	Soybean	nucleus	26.79	28.49
KRH67006	Soybean	nucleus	18.94	27.75

Protein Annotations

EntrezGene:100812081	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02005351	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G346300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
UniProt:I1KZ15	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH46615	ProteinID:KRH46615	ProteinID:KRH46615.1
EMBL:KT031113	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0001FBD815	InterPro:bHLH_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:46112189..46115547

Molecular Weight (calculated)

63808.3 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.717

Length

586 amino acids

Sequence
(BLAST)

001: MENQFFLNAG VPPQLHFEPS PHHHHHHLCP PPSWQSSLSS AMDVQVTVLN CSTEQNPDCF YNNTPTWDKS TDHHGLQFDS ALSSMVSSPA ASNSNMSSEN
101: FVIRELIGKL GNIGAGSDEI EISPHSQPLV GASSYINCNN NSTNTSCYST PLSSSPKVNM NKIPTMVKHL VKEGMPLSLG TSTSLNSTVA EFSADPGFAE
201: RAAKLSCFGS RSFNGRTTQL CLNIAELAQR SSPLVENGKK QLPRVSSSPS LKVLGSQMGT QENKNSPLQD LMEVANSQEE SAISEQTPNG DTGEKPSPYV
301: NSRKRKGPSK GKAKETSTST NPPMAAEASD DSNAKRSKPN EGEGNENGQV KAEEESKGGN NSNANDEKQN KSNSKPPEPP KDYIHVRARR GQATDSHSLA
401: ERVRREKISE RMKLLQDLVP GCNKVTGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNTRL DFSIESLISK DIFQSNNSLA QPIFPIDSSA PPFYGQQTQP
501: NPAIHNNIPN GTMTHNSVDP LDTGMCQNLG MHLPHLNGFN EGGFQYPITF SEDDLHTIVQ MGFGQTANRK TPIQSQSFNG SNQEPL

Best Arabidopsis Sequence Match ( AT3G07340.1 )
(BLAST)

001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL

Arabidopsis Description

BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.