Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G34530.1 | KRG92422 | AT1G04400.1 | 22739826 |
| AT4G34530.1 | KRH13218 | AT1G04400.1 | 22739826 |
| AT4G34530.1 | KRH34384 | AT1G04400.1 | 22739826 |
| AT4G34530.1 | KRH69122 | AT1G04400.1 | 22739826 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60839 | Soybean | nucleus | 88.46 | 80.23 |
| KRH24463 | Soybean | nucleus | 55.64 | 53.71 |
| KRH29448 | Soybean | nucleus | 55.38 | 51.31 |
| VIT_03s0038g04760.t01 | Wine grape | nucleus | 55.9 | 48.12 |
| PGSC0003DMT400001888 | Potato | nucleus | 47.69 | 42.08 |
| Solyc01g109700.2.1 | Tomato | nucleus | 45.9 | 41.24 |
| KRH56987 | Soybean | plastid | 22.56 | 39.29 |
| KRH03393 | Soybean | nucleus | 22.56 | 38.43 |
| CDX76288 | Canola | nucleus | 24.36 | 38.0 |
| KRH69414 | Soybean | nucleus | 24.62 | 37.65 |
| KRH63442 | Soybean | nucleus | 23.33 | 37.45 |
| CDY17466 | Canola | nucleus | 26.41 | 37.05 |
| Bra034636.1-P | Field mustard | nucleus | 26.67 | 37.01 |
| AT4G34530.1 | Thale cress | nucleus | 31.03 | 36.12 |
| KRH74729 | Soybean | nucleus | 24.36 | 35.98 |
| KRH45811 | Soybean | nucleus | 24.87 | 35.53 |
| KRH69415 | Soybean | nucleus | 23.59 | 35.38 |
| Bra011540.1-P | Field mustard | nucleus | 29.49 | 35.06 |
| CDX75440 | Canola | nucleus | 29.49 | 34.95 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 27.44 | 33.86 |
| CDX69067 | Canola | nucleus | 29.23 | 33.53 |
| KRH54478 | Soybean | nucleus | 23.08 | 33.46 |
| Zm00001d051569_P001 | Maize | nucleus | 27.18 | 30.99 |
| TraesCS6D01G253000.1 | Wheat | nucleus | 27.95 | 30.79 |
| TraesCS6B01G300400.1 | Wheat | nucleus | 27.44 | 30.48 |
| EES05656 | Sorghum | nucleus | 27.95 | 30.36 |
| TraesCS6A01G273000.2 | Wheat | nucleus | 27.69 | 29.92 |
| Os02t0705500-01 | Rice | nucleus | 27.69 | 29.92 |
| HORVU6Hr1G068980.2 | Barley | nucleus | 28.46 | 28.76 |
| Zm00001d017778_P001 | Maize | nucleus | 28.21 | 28.65 |
| KRH63842 | Soybean | nucleus | 25.38 | 28.61 |
| KRH54121 | Soybean | nucleus | 24.87 | 27.79 |
| GSMUA_Achr10P... | Banana | nucleus | 28.46 | 27.61 |
| KRH41084 | Soybean | nucleus | 23.08 | 26.55 |
| KRH52141 | Soybean | nucleus | 20.0 | 26.09 |
| KRH59766 | Soybean | nucleus | 22.82 | 26.02 |
| KRH71879 | Soybean | nucleus | 22.56 | 24.86 |
| KRG95332 | Soybean | nucleus | 22.82 | 24.32 |
| KRH33022 | Soybean | nucleus | 22.05 | 24.09 |
| KRH15460 | Soybean | nucleus | 25.64 | 23.31 |
| KRH61450 | Soybean | nucleus | 22.31 | 23.14 |
| KRG88634 | Soybean | nucleus, plastid | 25.64 | 22.99 |
| KRH67006 | Soybean | nucleus | 23.08 | 22.5 |
| KRG99606 | Soybean | nucleus | 33.33 | 22.41 |
| KRH46615 | Soybean | nucleus | 33.33 | 22.18 |
| KRH07417 | Soybean | nucleus, plastid | 33.33 | 22.07 |
| KRH66158 | Soybean | nucleus, plastid | 33.33 | 21.89 |
| KRH71031 | Soybean | nucleus | 28.72 | 20.33 |
| KRH75189 | Soybean | nucleus | 28.46 | 20.18 |
Protein Annotations
| EntrezGene:100819517 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02003379 | EnsemblPlantsGene:GLYMA_06G012200 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1K769 |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH51523 | ProteinID:KRH51523 | ProteinID:KRH51523.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00023C3FFE |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:900472..902864
Molecular Weight (calculated)
43073.4 Da
IEP (calculated)
7.416
GRAVY (calculated)
-0.590
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHCANTSGN LAVAGDMTVL ERQRARMKWQ EEQGYFSGNS FNGVFSSSSL HVHDSIMVAA DSGCALAEVV AQAQARSTNS SSISRTFSCP PALVEPESES
101: KPKPKPTDSS VGKDGFKKRK PDKPHHPKVV AENDNKDKRI KFGSDDGESK ITKSNTTNTN TNNNKETCAE TSNSKASEKP DYIHVRARRG QATDSHSLAE
201: RVRREKISER MKYLQDLVPG CNKVTGKAGM LDEIINYVQS LQRQVEFLSM KLAAVNPRLD LSIDDLFDKD VFSTCATNFP NIGISSTSDI SNPAYLQFNS
301: PQQIFSYDGL DPSDMGLRRT ISAPVSMPET YLQSSCFTQM LPSSTWEGDF QNLCNFDFDQ ARATSFPSQL LSGNYKSVPC RTTFFLSLLS
101: KPKPKPTDSS VGKDGFKKRK PDKPHHPKVV AENDNKDKRI KFGSDDGESK ITKSNTTNTN TNNNKETCAE TSNSKASEKP DYIHVRARRG QATDSHSLAE
201: RVRREKISER MKYLQDLVPG CNKVTGKAGM LDEIINYVQS LQRQVEFLSM KLAAVNPRLD LSIDDLFDKD VFSTCATNFP NIGISSTSDI SNPAYLQFNS
301: PQQIFSYDGL DPSDMGLRRT ISAPVSMPET YLQSSCFTQM LPSSTWEGDF QNLCNFDFDQ ARATSFPSQL LSGNYKSVPC RTTFFLSLLS
001: MNGAIGGDLL LNFPDMSVLE RQRAHLKYLN PTFDSPLAGF FADSSMITGG EMDSYLSTAG LNLPMMYGET TVEGDSRLSI SPETTLGTGN FKKRKFDTET
101: KDCNEKKKKM TMNRDDLVEE GEEEKSKITE QNNGSTKSIK KMKHKAKKEE NNFSNDSSKV TKELEKTDYI HVRARRGQAT DSHSIAERVR REKISERMKF
201: LQDLVPGCDK ITGKAGMLDE IINYVQSLQR QIEFLSMKLA IVNPRPDFDM DDIFAKEVAS TPMTVVPSPE MVLSGYSHEM VHSGYSSEMV NSGYLHVNPM
301: QQVNTSSDPL SCFNNGEAPS MWDSHVQNLY GNLGV
101: KDCNEKKKKM TMNRDDLVEE GEEEKSKITE QNNGSTKSIK KMKHKAKKEE NNFSNDSSKV TKELEKTDYI HVRARRGQAT DSHSIAERVR REKISERMKF
201: LQDLVPGCDK ITGKAGMLDE IINYVQSLQR QIEFLSMKLA IVNPRPDFDM DDIFAKEVAS TPMTVVPSPE MVLSGYSHEM VHSGYSSEMV NSGYLHVNPM
301: QQVNTSSDPL SCFNNGEAPS MWDSHVQNLY GNLGV
Arabidopsis Description
BHLH63CIB1 [Source:UniProtKB/TrEMBL;Acc:A0A178V495]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.