Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63442 | Soybean | nucleus | 84.01 | 93.0 |
| Solyc03g113560.2.1 | Tomato | cytosol | 29.0 | 76.47 |
| KRH03393 | Soybean | nucleus | 60.97 | 71.62 |
| KRH56987 | Soybean | plastid | 56.88 | 68.3 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 62.08 | 58.8 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 44.61 | 57.69 |
| KRH69414 | Soybean | nucleus | 53.53 | 56.47 |
| KRH45811 | Soybean | nucleus | 56.13 | 55.31 |
| KRH74729 | Soybean | nucleus | 54.28 | 55.3 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 42.38 | 55.07 |
| KRH69415 | Soybean | nucleus | 52.42 | 54.23 |
| PGSC0003DMT400062844 | Potato | nucleus | 57.62 | 53.26 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 49.07 | 51.16 |
| Os03t0802900-01 | Rice | nucleus | 50.19 | 50.94 |
| Zm00001d007768_P001 | Maize | nucleus | 46.84 | 50.2 |
| EER90712 | Sorghum | nucleus | 46.84 | 49.8 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 46.47 | 49.6 |
| Zm00001d034503_P002 | Maize | nucleus | 46.1 | 48.63 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 45.72 | 48.43 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 52.42 | 41.96 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 52.42 | 38.42 |
| KRH63842 | Soybean | nucleus | 32.71 | 25.43 |
| KRH54121 | Soybean | nucleus | 31.97 | 24.64 |
| KRH41084 | Soybean | nucleus | 30.48 | 24.19 |
| KRH52141 | Soybean | nucleus | 26.77 | 24.08 |
| KRH51523 | Soybean | nucleus | 33.46 | 23.08 |
| KRG95332 | Soybean | nucleus | 31.23 | 22.95 |
| KRH71879 | Soybean | nucleus | 30.11 | 22.88 |
| KRH59766 | Soybean | nucleus | 29.0 | 22.81 |
| KRH33022 | Soybean | nucleus | 29.74 | 22.41 |
| KRH24463 | Soybean | nucleus | 31.97 | 21.29 |
| KRH61450 | Soybean | nucleus | 29.74 | 21.28 |
| KRH29448 | Soybean | nucleus | 32.71 | 20.9 |
| KRH15460 | Soybean | nucleus | 32.71 | 20.51 |
| KRH67006 | Soybean | nucleus | 30.48 | 20.5 |
| KRH60839 | Soybean | nucleus | 32.71 | 20.47 |
| KRG88634 | Soybean | nucleus, plastid | 32.34 | 20.0 |
| KRH07417 | Soybean | nucleus, plastid | 40.89 | 18.68 |
| KRG99606 | Soybean | nucleus | 39.41 | 18.28 |
| KRH66158 | Soybean | nucleus, plastid | 40.15 | 18.18 |
| KRH46615 | Soybean | nucleus | 39.41 | 18.09 |
| KRH75189 | Soybean | nucleus | 34.2 | 16.73 |
| KRH71031 | Soybean | nucleus | 32.34 | 15.79 |
Protein Annotations
| EntrezGene:100777819 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02003532 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_06G188100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1KCM5 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH54478 | ProteinID:KRH54478 | ProteinID:KRH54478.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF305 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233944D | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:16413293..16416943
Molecular Weight (calculated)
28912.7 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.599
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPLITDST FSPAYSLAEI WPGMPHFPPP FPHPSSADHS TLTDLTATPR KRKDCSSSSS SASAADEDDC SKVLSSTTTA TANLSNNDSG SNKQMKLGGS
101: SVENDGFKAE AEASSAGGNK SSEQSNKPCE APKQDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD LVPGCNKVIG KALVLDEIIN YIQSLQRQVE
201: FLSMKLEAVN SRMNMNPTID GFPSKDVGTQ PFDIAGMVFG SQAARGYAQG SSPPGWLHMQ IGGGFERTT
101: SVENDGFKAE AEASSAGGNK SSEQSNKPCE APKQDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD LVPGCNKVIG KALVLDEIIN YIQSLQRQVE
201: FLSMKLEAVN SRMNMNPTID GFPSKDVGTQ PFDIAGMVFG SQAARGYAQG SSPPGWLHMQ IGGGFERTT
001: MDPPLVNDSS FSAANPSSYT LSEIWPFPVN DAVRSGLRLA VNSGRVFTRS EHSGNKDVSA AEESTVTDLT AGWGSRKTRD LNSEDDSSKM VSSSSSGNEL
101: KESGDKKRKL CGSESGNGDG SMRPEGETSS GGGGSKATEQ KNKPEPPKDY IHVRARRGQA TDRHSLAERA RREKISEKMT ALQDIIPGCN KIIGKALVLD
201: EIINYIQSLQ RQVEFLSMKL EVVNSGASTG PTIGVFPSGD LGTLPIDVHR TIYEQQEANE TRVSQPEWLH MQVDGNFNRT T
101: KESGDKKRKL CGSESGNGDG SMRPEGETSS GGGGSKATEQ KNKPEPPKDY IHVRARRGQA TDRHSLAERA RREKISEKMT ALQDIIPGCN KIIGKALVLD
201: EIINYIQSLQ RQVEFLSMKL EVVNSGASTG PTIGVFPSGD LGTLPIDVHR TIYEQQEANE TRVSQPEWLH MQVDGNFNRT T
Arabidopsis Description
BHLH79Transcription factor bHLH79 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.