Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH71879 | Soybean | nucleus | 91.04 | 91.81 |
KRG95332 | Soybean | nucleus | 70.59 | 68.85 |
KRH67006 | Soybean | nucleus | 70.03 | 62.5 |
VIT_08s0007g07870.t01 | Wine grape | nucleus | 59.1 | 57.97 |
Bra004679.1-P | Field mustard | nucleus | 45.38 | 53.64 |
PGSC0003DMT400021130 | Potato | nucleus | 53.78 | 53.33 |
CDX79883 | Canola | nucleus | 44.54 | 52.65 |
Solyc10g079070.1.1 | Tomato | nucleus | 53.22 | 52.63 |
AT2G42300.1 | Thale cress | nucleus | 47.9 | 52.29 |
CDY53497 | Canola | nucleus | 44.26 | 51.13 |
CDY47666 | Canola | endoplasmic reticulum, extracellular | 19.61 | 50.72 |
CDX88966 | Canola | nucleus | 46.78 | 50.3 |
Bra007358.1-P | Field mustard | nucleus | 49.58 | 49.44 |
CDY06074 | Canola | nucleus | 49.3 | 49.44 |
CDX67710 | Canola | nucleus | 44.54 | 49.38 |
Os06t0613500-01 | Rice | cytosol, nucleus | 24.37 | 48.88 |
Bra003300.1-P | Field mustard | nucleus | 43.98 | 48.76 |
CDX98249 | Canola | nucleus | 38.1 | 48.57 |
Bra014603.1-P | Field mustard | nucleus | 47.06 | 48.55 |
CDX71994 | Canola | nucleus | 49.02 | 48.48 |
TraesCS7B01G303300.1 | Wheat | nucleus | 38.94 | 44.27 |
TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 38.66 | 43.67 |
GSMUA_Achr1P19610_001 | Banana | nucleus | 44.54 | 43.56 |
GSMUA_Achr4P19330_001 | Banana | nucleus | 45.94 | 42.38 |
AT3G57800.1 | Thale cress | nucleus | 50.14 | 42.02 |
TraesCS7A01G403900.1 | Wheat | cytosol | 17.93 | 41.56 |
GSMUA_Achr9P22300_001 | Banana | nucleus | 33.61 | 41.38 |
HORVU7Hr1G094690.1 | Barley | plastid | 28.57 | 41.3 |
CDY47665 | Canola | cytosol | 29.69 | 41.25 |
GSMUA_Achr7P06330_001 | Banana | nucleus | 40.62 | 39.62 |
Zm00001d046759_P001 | Maize | plastid | 38.1 | 38.2 |
Zm00001d036807_P001 | Maize | nucleus | 38.66 | 37.3 |
OQU76702 | Sorghum | nucleus | 39.78 | 34.63 |
KRH56987 | Soybean | plastid | 21.29 | 33.93 |
KRH03393 | Soybean | nucleus | 21.29 | 33.19 |
KRH69414 | Soybean | nucleus | 22.41 | 31.37 |
KRH63442 | Soybean | nucleus | 21.01 | 30.86 |
KRH69415 | Soybean | nucleus | 22.41 | 30.77 |
KRH74729 | Soybean | nucleus | 22.13 | 29.92 |
KRH54478 | Soybean | nucleus | 22.41 | 29.74 |
KRH45811 | Soybean | nucleus | 21.57 | 28.21 |
KRH54121 | Soybean | nucleus | 24.09 | 24.64 |
KRH63842 | Soybean | nucleus | 23.53 | 24.28 |
KRH41084 | Soybean | nucleus | 22.97 | 24.19 |
KRH52141 | Soybean | nucleus | 20.17 | 24.08 |
KRH59766 | Soybean | nucleus | 22.69 | 23.68 |
KRH29448 | Soybean | nucleus | 26.33 | 22.33 |
KRH61450 | Soybean | nucleus | 23.25 | 22.07 |
KRH51523 | Soybean | nucleus | 24.09 | 22.05 |
KRH24463 | Soybean | nucleus | 24.93 | 22.03 |
KRH15460 | Soybean | nucleus | 24.93 | 20.75 |
KRG88634 | Soybean | nucleus, plastid | 24.65 | 20.23 |
KRH60839 | Soybean | nucleus | 23.81 | 19.77 |
KRH75189 | Soybean | nucleus | 29.69 | 19.27 |
KRH07417 | Soybean | nucleus, plastid | 31.37 | 19.02 |
KRH71031 | Soybean | nucleus | 29.13 | 18.87 |
KRH66158 | Soybean | nucleus, plastid | 30.81 | 18.52 |
KRG99606 | Soybean | nucleus | 29.97 | 18.45 |
KRH46615 | Soybean | nucleus | 29.41 | 17.92 |
Protein Annotations
EntrezGene:100810862 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02006228 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_10G093600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
UniProt:I1L9V5 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH33022 | ProteinID:KRH33022 | ProteinID:KRH33022.1 |
ProteinID:KRH33023.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF112 | SMART:SM00353 |
SUPFAM:SSF47459 | UniParc:UPI0001BA87B6 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:13352755..13359896
Molecular Weight (calculated)
39026.8 Da
IEP (calculated)
7.029
GRAVY (calculated)
-0.644
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQTTLEAIQ FNEEIQGLMA APAPETVNSF KALLELPSTQ AVELLHSPER ARKPLRHSPK PPTPPPPHPP TSPSFTASAS AATANLTFPS NAALIERAAR
101: FSVFAGQNSN SNSNSPEVKR ELPETDSNPS STHGGGGGGS VSDLAMENKN PKTAKRKERE KKVKASSRKS KSVAAATDES SGDGEKLPYV HVRVRRGQAT
201: DSHSLAERAR REKINARMKL LQELVPGCNK ISGTALVLDK IINHVQSLQN EVEILSMKLA AVNPVIDFNL DSLLATEGVT PMDCNFPPTV APVMWPEIPQ
301: NGNRQQYQQP WQFDAFHQPL WGREEDNTNM TPENSLWSYD SSANSVSLHS NQLKMEL
101: FSVFAGQNSN SNSNSPEVKR ELPETDSNPS STHGGGGGGS VSDLAMENKN PKTAKRKERE KKVKASSRKS KSVAAATDES SGDGEKLPYV HVRVRRGQAT
201: DSHSLAERAR REKINARMKL LQELVPGCNK ISGTALVLDK IINHVQSLQN EVEILSMKLA AVNPVIDFNL DSLLATEGVT PMDCNFPPTV APVMWPEIPQ
301: NGNRQQYQQP WQFDAFHQPL WGREEDNTNM TPENSLWSYD SSANSVSLHS NQLKMEL
001: MDLTQGFRAR SGVVGPVAGL ESLNFSDEFR HLVTTMPPET TGGSFTALLE MPVTQAMELL HFPDSSSSQA RTVTSGDISP TTLHPFGALT FPSNSLLLDR
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
Arabidopsis Description
BHLH48Transcription factor bHLH48 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ02]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.