Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0613500-01 | Rice | cytosol, nucleus | 40.81 | 84.83 |
| Zm00001d046759_P001 | Maize | plastid | 79.73 | 82.87 |
| TraesCS7A01G403900.1 | Wheat | cytosol | 33.24 | 79.87 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 65.41 | 77.07 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 65.41 | 76.58 |
| OQU76702 | Sorghum | nucleus | 78.92 | 71.22 |
| HORVU7Hr1G094690.1 | Barley | plastid | 46.76 | 70.04 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 44.05 | 44.54 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 46.49 | 44.44 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 43.78 | 44.38 |
| CDX98249 | Canola | nucleus | 31.62 | 41.79 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 15.41 | 41.3 |
| CDX67710 | Canola | nucleus | 35.68 | 40.99 |
| Bra003300.1-P | Field mustard | nucleus | 35.41 | 40.68 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 40.0 | 40.66 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 30.81 | 39.31 |
| KRH71879 | Soybean | nucleus | 37.57 | 39.27 |
| KRH33022 | Soybean | nucleus | 37.3 | 38.66 |
| PGSC0003DMT400021130 | Potato | nucleus | 37.57 | 38.61 |
| CDX88966 | Canola | nucleus | 34.59 | 38.55 |
| Bra004679.1-P | Field mustard | nucleus | 31.35 | 38.41 |
| Solyc10g079070.1.1 | Tomato | nucleus | 37.3 | 38.23 |
| AT2G42300.1 | Thale cress | nucleus | 33.78 | 38.23 |
| Bra014603.1-P | Field mustard | nucleus | 35.68 | 38.15 |
| CDX79883 | Canola | nucleus | 31.08 | 38.08 |
| Bra007358.1-P | Field mustard | nucleus | 36.76 | 37.99 |
| KRG95332 | Soybean | nucleus | 37.57 | 37.98 |
| CDY06074 | Canola | nucleus | 36.49 | 37.92 |
| CDY53497 | Canola | nucleus | 31.62 | 37.86 |
| CDX71994 | Canola | nucleus | 36.22 | 37.12 |
| KRH67006 | Soybean | nucleus | 37.57 | 34.75 |
| CDY47665 | Canola | cytosol | 22.7 | 32.68 |
| AT3G57800.1 | Thale cress | nucleus | 36.22 | 31.46 |
| Zm00001d034503_P002 | Maize | nucleus | 20.27 | 29.41 |
| Zm00001d007768_P001 | Maize | nucleus | 19.46 | 28.69 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 18.65 | 24.04 |
| Zm00001d051569_P001 | Maize | nucleus | 21.89 | 23.68 |
| Zm00001d033870_P001 | Maize | nucleus | 20.27 | 23.22 |
| Zm00001d049870_P001 | Maize | nucleus | 19.73 | 22.88 |
| Zm00001d031665_P001 | Maize | mitochondrion | 19.46 | 22.86 |
| Zm00001d021019_P001 | Maize | nucleus | 21.62 | 22.6 |
| Zm00001d006065_P002 | Maize | nucleus | 21.35 | 22.57 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 19.19 | 22.12 |
| Zm00001d017778_P001 | Maize | nucleus | 22.43 | 21.61 |
| Zm00001d031561_P002 | Maize | nucleus | 22.7 | 21.48 |
| Zm00001d049158_P001 | Maize | nucleus | 25.68 | 21.4 |
| Zm00001d020826_P001 | Maize | nucleus | 24.86 | 21.2 |
| Zm00001d042373_P002 | Maize | nucleus | 25.68 | 20.52 |
| Zm00001d005964_P002 | Maize | nucleus | 24.32 | 19.87 |
| Zm00001d007311_P001 | Maize | nucleus | 24.32 | 19.52 |
| Zm00001d012067_P003 | Maize | nucleus | 24.86 | 19.17 |
| Zm00001d013357_P001 | Maize | nucleus | 17.3 | 18.39 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1D6LRB4 | ProteinID:AQK81999.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF112 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000220CD9E | EnsemblPlantsGene:Zm00001d036807 | EnsemblPlants:Zm00001d036807_P001 | EnsemblPlants:Zm00001d036807_T001 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
bHLH-transcription factor 142Putative HLH DNA-binding domain superfamily protein
Coordinates
chr6:+:101495580..101501691
Molecular Weight (calculated)
39513.0 Da
IEP (calculated)
9.031
GRAVY (calculated)
-0.405
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHASPPQEL PAAGREIQAA LAPANGNAAG ARGGGGSFTA LLGLPTPQAM ELLLPRTTPP ALALAPAAAP APTPTFPSDP HLVDRAGRFS TFAPPSPPSP
101: SPTQQPPPPP PAAVAGKRKA DPVDRASKGK AAKKGKTAEE KPAAAGGEDE KPAYVHVRAR RGQATDSHSL AERARREKIN ARMELLKELV PGCSKVSGTA
201: LVLDEIINHV QSLQRQVEYL SMRLATVNPR GDFGGLDSFL TTECGRIASF NCKNGIDLEQ VTWPEMGVHG ARQLMQLQQQ FWHGDLAHPH QVASQWEKRG
301: DGHPPVFSNS SPSLFGYDLT SSGKPCTQSY ITFLNEFSCL SLTSHITAWL APQLLSLSLS RQCSLENKVY
101: SPTQQPPPPP PAAVAGKRKA DPVDRASKGK AAKKGKTAEE KPAAAGGEDE KPAYVHVRAR RGQATDSHSL AERARREKIN ARMELLKELV PGCSKVSGTA
201: LVLDEIINHV QSLQRQVEYL SMRLATVNPR GDFGGLDSFL TTECGRIASF NCKNGIDLEQ VTWPEMGVHG ARQLMQLQQQ FWHGDLAHPH QVASQWEKRG
301: DGHPPVFSNS SPSLFGYDLT SSGKPCTQSY ITFLNEFSCL SLTSHITAWL APQLLSLSLS RQCSLENKVY
001: MDLTQGFRAR SGVVGPVAGL ESLNFSDEFR HLVTTMPPET TGGSFTALLE MPVTQAMELL HFPDSSSSQA RTVTSGDISP TTLHPFGALT FPSNSLLLDR
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
Arabidopsis Description
BHLH48Transcription factor bHLH48 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ02]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.