Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031665_P001 | Maize | mitochondrion | 69.91 | 70.79 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 62.38 | 67.69 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 58.93 | 60.84 |
| TraesCS7A01G263700.1 | Wheat | nucleus | 58.62 | 60.32 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 63.32 | 60.3 |
| TraesCS7B01G161700.3 | Wheat | nucleus, plastid | 63.32 | 60.3 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 46.08 | 51.22 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 46.71 | 46.42 |
| PGSC0003DMT400069568 | Potato | nucleus | 31.66 | 35.56 |
| VIT_17s0000g00430.t01 | Wine grape | nucleus | 38.87 | 35.53 |
| Bra022753.1-P | Field mustard | nucleus | 31.97 | 34.34 |
| Solyc06g072520.1.1 | Tomato | nucleus, plastid | 31.03 | 34.26 |
| CDY45806 | Canola | nucleus | 31.35 | 34.13 |
| CDX84885 | Canola | nucleus | 31.66 | 34.01 |
| Solyc03g097820.1.1 | Tomato | nucleus | 34.8 | 33.64 |
| KRH63842 | Soybean | nucleus | 36.36 | 33.53 |
| PGSC0003DMT400051137 | Potato | nucleus | 35.11 | 33.14 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 27.59 | 32.59 |
| AT5G50915.2 | Thale cress | nucleus | 29.15 | 32.52 |
| KRH59766 | Soybean | nucleus | 34.48 | 32.16 |
| KRH54121 | Soybean | nucleus | 35.11 | 32.09 |
| KRH41084 | Soybean | nucleus | 33.86 | 31.86 |
| Zm00001d007768_P001 | Maize | nucleus | 23.51 | 29.88 |
| Zm00001d034503_P002 | Maize | nucleus | 23.82 | 29.8 |
| Zm00001d051569_P001 | Maize | nucleus | 30.41 | 28.36 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 31.66 | 26.1 |
| Zm00001d033870_P001 | Maize | nucleus | 24.76 | 24.46 |
| Zm00001d006065_P002 | Maize | nucleus | 26.33 | 24.0 |
| Zm00001d021019_P001 | Maize | nucleus | 26.02 | 23.45 |
| Zm00001d017778_P001 | Maize | nucleus | 28.21 | 23.44 |
| Zm00001d031561_P002 | Maize | nucleus | 26.96 | 21.99 |
| Zm00001d020826_P001 | Maize | nucleus | 29.15 | 21.43 |
| Zm00001d046759_P001 | Maize | plastid | 23.82 | 21.35 |
| Zm00001d005964_P002 | Maize | nucleus | 29.47 | 20.75 |
| Zm00001d049158_P001 | Maize | nucleus | 28.53 | 20.5 |
| Zm00001d007311_P001 | Maize | nucleus | 28.53 | 19.74 |
| Zm00001d036807_P001 | Maize | nucleus | 22.88 | 19.73 |
| Zm00001d013357_P001 | Maize | nucleus | 21.32 | 19.54 |
| Zm00001d042373_P002 | Maize | nucleus | 27.27 | 18.79 |
| Zm00001d012067_P003 | Maize | nucleus | 27.27 | 18.12 |
Protein Annotations
| EntrezGene:100502330 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | ProteinID:AQK51498.1 | EMBL:BT087813 |
| UniProt:C4JAG6 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EMBL:KJ726885 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF302 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0001A4C1A4 | EnsemblPlantsGene:Zm00001d049870 | EnsemblPlants:Zm00001d049870_P001 |
| EnsemblPlants:Zm00001d049870_T001 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
bHLH-transcription factor 165Transcription factor bHLH137
Coordinates
chr4:-:49701453..49703760
Molecular Weight (calculated)
34068.8 Da
IEP (calculated)
6.424
GRAVY (calculated)
-0.458
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MADADLTPNH SLLLKMPAAS AHAHSPSLSS LLLYGQESHG EAAPANANAN AAAATVEDAA SLETSSAVVD SASPMERKRK ATAEDSAAIS SPQPKDCKQE
101: SKSRRGKRPR KETEEKSSTD EDEASKGYIH VRARRGQATD SHSLAERVRR ERISERMRML QALVPGCDKV TGKAMVLDEI INYVQSLQNQ VEFLSMRIAS
201: MSPVLYGFGT NSEGLHDHHA PKMGGVSFQE AAIAVPAGPA AAVSQASSRP APSEATMNTA CTTTPYSVSL QAQASISFSP SQENGGTYYL VQQAVGEQAT
301: RQEELLLSQL VFSNMCSFQ
101: SKSRRGKRPR KETEEKSSTD EDEASKGYIH VRARRGQATD SHSLAERVRR ERISERMRML QALVPGCDKV TGKAMVLDEI INYVQSLQNQ VEFLSMRIAS
201: MSPVLYGFGT NSEGLHDHHA PKMGGVSFQE AAIAVPAGPA AAVSQASSRP APSEATMNTA CTTTPYSVSL QAQASISFSP SQENGGTYYL VQQAVGEQAT
301: RQEELLLSQL VFSNMCSFQ
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.