Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91059 | Sorghum | nucleus | 90.71 | 93.02 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 76.78 | 78.48 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 77.71 | 77.23 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 77.09 | 77.09 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 63.78 | 76.3 |
| Zm00001d013357_P001 | Maize | nucleus | 82.04 | 76.15 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 75.54 | 75.54 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 29.72 | 42.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.34 | 34.63 |
| CDY31048 | Canola | nucleus | 33.13 | 34.08 |
| Bra031700.1-P | Field mustard | nucleus | 33.44 | 33.03 |
| CDY20659 | Canola | nucleus | 33.75 | 32.73 |
| CDY22605 | Canola | nucleus | 35.6 | 32.58 |
| CDY53834 | Canola | nucleus | 34.98 | 32.56 |
| CDY63738 | Canola | nucleus | 33.75 | 31.87 |
| Bra018461.1-P | Field mustard | nucleus | 31.58 | 31.68 |
| AT1G10120.1 | Thale cress | nucleus | 35.6 | 31.42 |
| Bra019962.1-P | Field mustard | nucleus | 32.82 | 31.27 |
| Zm00001d034503_P002 | Maize | nucleus | 23.53 | 29.8 |
| Solyc04g077480.2.1 | Tomato | nucleus | 34.37 | 29.06 |
| PGSC0003DMT400012591 | Potato | nucleus | 34.06 | 28.8 |
| Zm00001d007768_P001 | Maize | nucleus | 21.98 | 28.29 |
| CDY57925 | Canola | nucleus | 33.44 | 27.14 |
| KRH61450 | Soybean | nucleus | 31.58 | 27.13 |
| KRH52141 | Soybean | nucleus | 25.08 | 27.09 |
| Zm00001d051569_P001 | Maize | nucleus | 28.17 | 26.61 |
| Zm00001d006065_P002 | Maize | nucleus | 28.48 | 26.29 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 34.67 | 26.05 |
| Zm00001d031665_P001 | Maize | mitochondrion | 25.39 | 26.03 |
| Zm00001d021019_P001 | Maize | nucleus | 28.48 | 25.99 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 22.6 | 25.44 |
| Zm00001d031561_P002 | Maize | nucleus | 30.65 | 25.32 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 24.77 | 24.92 |
| Zm00001d020826_P001 | Maize | nucleus | 33.44 | 24.88 |
| Zm00001d049870_P001 | Maize | nucleus | 24.46 | 24.76 |
| KRH15460 | Soybean | nucleus | 32.82 | 24.71 |
| KRG88634 | Soybean | nucleus, plastid | 33.13 | 24.6 |
| Zm00001d042373_P002 | Maize | nucleus | 34.37 | 23.97 |
| Zm00001d017778_P001 | Maize | nucleus | 28.48 | 23.96 |
| Zm00001d005964_P002 | Maize | nucleus | 33.44 | 23.84 |
| Zm00001d012067_P003 | Maize | nucleus | 34.67 | 23.33 |
| Zm00001d007311_P001 | Maize | nucleus | 30.34 | 21.26 |
| Zm00001d049158_P001 | Maize | nucleus | 29.1 | 21.17 |
| Zm00001d046759_P001 | Maize | plastid | 22.6 | 20.51 |
| Zm00001d036807_P001 | Maize | nucleus | 23.22 | 20.27 |
Protein Annotations
| EntrezGene:100193160 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1D6L304 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| ProteinID:ONM08845.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0008450DE2 | EnsemblPlantsGene:Zm00001d033870 | EnsemblPlants:Zm00001d033870_P001 | EnsemblPlants:Zm00001d033870_T001 | InterPro:bHLH_dom |
Description
bHLH-transcription factor 27Transcription factor bHLH62
Coordinates
chr1:-:276811932..276815064
Molecular Weight (calculated)
35518.9 Da
IEP (calculated)
6.044
GRAVY (calculated)
-0.627
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSGQQSDQG PSANSGREFS EANWNSYTMH QKIAYSGQHG FGPYGMGLED RLGLYQSSSG TLSHDIQMSD EHSGGVKKRK GVEDCVTLLP NAGDQQTEGS
101: SQPERNSMEE GNRKISPKIQ SKEDSSDGDG TKEDYVHIRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCSKITGK AVMLDEIINY VQSLQRQVEF
201: LSMKLSTVNP ELGFDIEQII SKQMMLSQDR HLAFYGVDPG SSSLTAPFNQ GIVQPAMMCN ISNPADVLHG TIHDVSTMNQ IPSMWEGLQS MPQMNFNPGV
301: AADSGTNNSG IYVILSSSMK IEQ
101: SQPERNSMEE GNRKISPKIQ SKEDSSDGDG TKEDYVHIRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCSKITGK AVMLDEIINY VQSLQRQVEF
201: LSMKLSTVNP ELGFDIEQII SKQMMLSQDR HLAFYGVDPG SSSLTAPFNQ GIVQPAMMCN ISNPADVLHG TIHDVSTMNQ IPSMWEGLQS MPQMNFNPGV
301: AADSGTNNSG IYVILSSSMK IEQ
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.