Factsheet for Zm00001d031561_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15330	Sorghum	nucleus	84.65	83.38
Os08t0524800-01	Rice	nucleus	75.45	72.84
TraesCS7B01G152800.1	Wheat	nucleus	71.36	72.47
TraesCS7D01G257000.2	Wheat	nucleus	71.61	72.35
HORVU7Hr1G052870.23	Barley	nucleus	66.75	66.41
TraesCS7A01G256200.3	Wheat	nucleus	66.5	65.49
Zm00001d006065_P002	Maize	nucleus	51.66	57.71
Zm00001d021019_P001	Maize	nucleus	51.15	56.5
Zm00001d034503_P002	Maize	nucleus	23.53	36.08
Zm00001d007768_P001	Maize	nucleus	22.76	35.46
Zm00001d033870_P001	Maize	nucleus	25.32	30.65
Zm00001d021086_P001	Maize	nucleus, plastid	21.48	29.27
Zm00001d020826_P001	Maize	nucleus	31.97	28.8
Zm00001d031665_P001	Maize	mitochondrion	22.51	27.94
Zm00001d051569_P001	Maize	nucleus	24.3	27.78
Zm00001d042373_P002	Maize	nucleus	32.74	27.65
Solyc09g057710.2.1	Tomato	nucleus	32.74	27.0
Zm00001d049870_P001	Maize	nucleus	21.99	26.96
Zm00001d005964_P002	Maize	nucleus	30.69	26.49
Zm00001d017778_P001	Maize	nucleus	25.83	26.3
Zm00001d006110_P002	Maize	nucleus, plastid	21.48	26.17
PGSC0003DMT400053639	Potato	nucleus	32.48	25.81
Zm00001d012067_P003	Maize	nucleus	31.2	25.42
Zm00001d013357_P001	Maize	nucleus	21.99	24.71
Zm00001d046759_P001	Maize	plastid	21.99	24.16
GSMUA_Achr10P...	Banana	nucleus	25.58	23.64
Zm00001d049158_P001	Maize	nucleus	26.6	23.42
GSMUA_Achr7P22770_001	Banana	nucleus	26.34	23.3
Zm00001d036807_P001	Maize	nucleus	21.48	22.7
Zm00001d007311_P001	Maize	nucleus	26.6	22.56
GSMUA_Achr4P16120_001	Banana	nucleus	25.32	21.66
GSMUA_Achr7P02770_001	Banana	nucleus	25.83	20.7

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	UniProt:A0A1D6KJN8	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	ProteinID:ONM03145.1
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF169	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0008424199	EnsemblPlantsGene:Zm00001d031561	EnsemblPlants:Zm00001d031561_P002	EnsemblPlants:Zm00001d031561_T002	InterPro:bHLH_dom	SEG:seg

Description

bHLH-transcription factor 81Transcription factor bHLH62

Coordinates

chr1:+:194339694..194342403

Molecular Weight (calculated)

41293.1 Da

IEP (calculated)

5.185

GRAVY (calculated)

-0.578

Length

391 amino acids

Sequence
(BLAST)

001: MKEGRPGAGD YIASLLSSSP RLDFGGEEEE DCLDRFCGDP GFAARAARLS SFSGQRFAVT AGLFGLPPPL PAASGGGEFA GSREASSVSD PASAMKDANA
101: KKRKAPAAAA AKGKGREPSA QAQAGEPKGP DAKRCCKAEG GEGEEGSPVK LPKPEQAGSD SSVEDGGAQN QKPPPPVKGK NAKPVEPPRD YVHVRARRGQ
201: ATDSHSLAER VRRERISQRM KVLQDLVPGC NKVIGKALML DEIINYVQSL QRQVEFLSMK LATVNPLDLS NLPTLLQKDM FQACGASASS VFSLESCSPG
301: FPFGGQGDVF QSFVPNGLEN PCGGLNPLDL ALSQATGGQF GFQDGTAGTN LQQRNYWEEE EEDLQSVFHI DDNGQSQEHG ASASAQSFHG W

Best Arabidopsis Sequence Match ( AT1G68920.1 )
(BLAST)

001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP

Arabidopsis Description

BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.