Factsheet for TraesCS7A01G256200.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G052870.23	Barley	nucleus	90.68	91.6
TraesCS7D01G257000.2	Wheat	nucleus	86.15	88.37
TraesCS7B01G152800.1	Wheat	nucleus	85.64	88.31
EES15330	Sorghum	nucleus	71.03	71.03
Os08t0524800-01	Rice	nucleus	72.04	70.62
Zm00001d031561_P002	Maize	nucleus	65.49	66.5
TraesCS5A01G279200.2	Wheat	nucleus	48.36	49.74
TraesCS5A01G292900.1	Wheat	nucleus	22.67	32.03
TraesCS7A01G263700.1	Wheat	nucleus	23.93	30.65
TraesCS7A01G403900.1	Wheat	cytosol	11.59	29.87
TraesCS4A01G255800.3	Wheat	nucleus	23.68	28.92
TraesCS5A01G250600.1	Wheat	nucleus	30.23	28.24
TraesCS6A01G273000.2	Wheat	nucleus	25.19	27.7
TraesCS3A01G421400.1	Wheat	nucleus	30.48	27.69
Solyc09g057710.2.1	Tomato	nucleus	31.23	26.16
PGSC0003DMT400053639	Potato	nucleus	30.98	25.0
GSMUA_Achr10P...	Banana	nucleus	25.44	23.88
TraesCS7A01G211900.1	Wheat	nucleus	25.19	22.73
GSMUA_Achr7P22770_001	Banana	nucleus	25.19	22.62
TraesCS2A01G275600.1	Wheat	nucleus	22.42	21.92
GSMUA_Achr4P16120_001	Banana	nucleus	24.18	21.01
GSMUA_Achr7P02770_001	Banana	nucleus	24.94	20.29

Protein Annotations

EnsemblPlants:TraesCS7A01G256200.3	EnsemblPlantsGene:TraesCS7A01G256200	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF169	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:	:

Description

No Description!

Coordinates

chr7A:-:244603318..244605045

Molecular Weight (calculated)

42549.2 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.382

Length

397 amino acids

Sequence
(BLAST)

001: MEGRAGGGGS GDYITSLLTS SPMLDFGVLD GAVAAGGDCL DKFCGDPGFA ERAARLSSFN GQHFAPGLFG MPPPGEFGGS REASSVSDPA SAMKDANAKK
101: RKAPAGKGKA KEPSLSTSCQ VGEQKEADGK RCRTGDAEKK VKPKAEQAGS DSSVEDGEQR KGGKGKNAKP AEPPKDYVHV RARRGQATDS HSLAERVRRE
201: RISQRMKFLQ DLVPGCNKVI GKALMLDEII NYVQSLQRQV EFLSMKLATV NPLDFSNLPT LLHKDMYGPS ASSVFSLESS SSAFPFSDQG DVFQSFLPSS
301: MESQCTLNQL DLALSQATNA AAQYAFQDGT ATASTNLQQV IILAFRISWL FASLDERIVI DLILIQFSFV LRLSAEEFLG GRSPERFSCG HQQAEPG

Best Arabidopsis Sequence Match ( AT3G07340.1 )
(BLAST)

001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL

Arabidopsis Description

BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.