Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P22770_001 | Banana | nucleus | 68.56 | 65.61 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 15.84 | 55.37 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 17.26 | 44.51 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 17.02 | 39.13 |
| GSMUA_Achr10P... | Banana | nucleus | 16.78 | 38.59 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 23.4 | 38.37 |
| Os04t0350700-01 | Rice | nucleus | 21.75 | 34.98 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 18.68 | 34.96 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 35.22 | 32.6 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 21.04 | 32.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.2 | 31.82 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 36.64 | 31.76 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 24.59 | 30.95 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 26.24 | 30.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.86 | 29.68 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 19.39 | 29.08 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 21.28 | 28.48 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 21.04 | 28.08 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 23.64 | 27.62 |
| Zm00001d042373_P002 | Maize | nucleus | 29.79 | 27.21 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 26.95 | 27.01 |
| TraesCS3A01G421400.1 | Wheat | nucleus | 27.9 | 27.0 |
| Zm00001d006065_P002 | Maize | nucleus | 22.22 | 26.86 |
| Os09t0501600-01 | Rice | nucleus | 23.17 | 26.78 |
| Os11t0442500-00 | Rice | nucleus | 23.64 | 26.67 |
| Zm00001d012067_P003 | Maize | nucleus | 30.26 | 26.67 |
| EES04098 | Sorghum | nucleus | 30.26 | 26.45 |
| OQU89735 | Sorghum | nucleus | 21.99 | 26.42 |
| Zm00001d021019_P001 | Maize | nucleus | 21.99 | 26.27 |
| Os01t0915600-01 | Rice | nucleus | 29.79 | 26.2 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 18.91 | 26.14 |
| TraesCS7D01G257000.2 | Wheat | nucleus | 23.88 | 26.1 |
| TraesCS7B01G152800.1 | Wheat | nucleus | 23.64 | 25.97 |
| GSMUA_Achr10P... | Banana | nucleus | 16.78 | 25.63 |
| Zm00001d031561_P002 | Maize | nucleus | 23.64 | 25.58 |
| HORVU7Hr1G052870.23 | Barley | nucleus | 23.64 | 25.45 |
| TraesCS7A01G256200.3 | Wheat | nucleus | 23.88 | 25.44 |
| Solyc09g057710.2.1 | Tomato | nucleus | 28.37 | 25.32 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 20.57 | 25.07 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 18.44 | 25.0 |
| EES15330 | Sorghum | nucleus | 23.4 | 24.94 |
| TraesCS5B01G278600.1 | Wheat | nucleus | 21.99 | 24.93 |
| TraesCS3B01G457400.1 | Wheat | nucleus | 27.9 | 24.89 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 21.99 | 24.8 |
| Os08t0524800-01 | Rice | nucleus | 23.64 | 24.69 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 27.9 | 24.63 |
| TraesCS5A01G279200.2 | Wheat | nucleus | 22.46 | 24.61 |
| PGSC0003DMT400053639 | Potato | nucleus | 28.13 | 24.19 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 23.64 | 24.15 |
| TraesCS2D01G274600.1 | Wheat | nucleus | 23.4 | 24.15 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 27.19 | 24.06 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 29.55 | 23.95 |
| TraesCS2A01G275600.1 | Wheat | nucleus | 22.93 | 23.89 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 21.51 | 23.88 |
| TraesCS2B01G293300.1 | Wheat | nucleus | 23.4 | 23.63 |
| OQU83382 | Sorghum | nucleus | 23.4 | 23.02 |
| GSMUA_Achr10P... | Banana | nucleus | 21.51 | 22.64 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 17.02 | 22.57 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 19.39 | 22.47 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 26.71 | 22.47 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 19.39 | 22.4 |
| Zm00001d049158_P001 | Maize | nucleus | 23.4 | 22.3 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 15.13 | 22.07 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 22.22 | 22.07 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 21.28 | 20.98 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 19.15 | 20.93 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 21.51 | 20.87 |
| Zm00001d007311_P001 | Maize | nucleus | 22.7 | 20.82 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 26.95 | 20.0 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 18.2 | 19.9 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 21.28 | 19.52 |
| HORVU3Hr1G093310.2 | Barley | nucleus, plasma membrane, plastid | 28.37 | 18.87 |
| GSMUA_Achr10P... | Banana | mitochondrion | 28.61 | 18.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P28920_001 | EnsemblPlants:GSMUA_Achr10T28920_001 | EnsemblPlantsGene:GSMUA_Achr10G28920_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF169 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000295E8F4 | UniProt:M0RMB6 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
Putative Transcription factor bHLH62 [Source:GMGC_GENE;Acc:GSMUA_Achr10G28920_001]
Coordinates
chr10:-:31589574..31591509
Molecular Weight (calculated)
46207.4 Da
IEP (calculated)
6.914
GRAVY (calculated)
-0.604
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MYCGLPDQLP SCLLDLNWDQ TMDTAGHFES VLSSIAPPSQ SIGNSSDGTW PRSHHIGVRL NSPPKPNLSV LGHIRHLQQE ATGGVAVSTQ LDQFYSFGGR
101: NYGHLAPQFG LLDTLQMELP LRLNANNGEL MNAREESSLS DPTTRGVSSG GAARSNSKKR KAPPTDKVKG DAILANSAID PPKVAKEEDS DAKRCRSMVK
201: NRDENDAVKP KAEQNDGCSS NGNGGQKQCR ENTAKSTEPP KDYIHVRARR GQATDSHSLA ERVRREKISQ RMKLLQDLVP GCNKVTGKAV MLDEIIIYVQ
301: SLQRQVEFLS MKLATVNPHL DFNNLSNLLP KDVHQTCGAM PNSVYSLEAS GVAPPYINQP SLHCVLPDGM EIHRSADLLG STLHQNVNTH QPLLAGFENS
401: PSQLGNFWED GLQNVSQMDI GHD
101: NYGHLAPQFG LLDTLQMELP LRLNANNGEL MNAREESSLS DPTTRGVSSG GAARSNSKKR KAPPTDKVKG DAILANSAID PPKVAKEEDS DAKRCRSMVK
201: NRDENDAVKP KAEQNDGCSS NGNGGQKQCR ENTAKSTEPP KDYIHVRARR GQATDSHSLA ERVRREKISQ RMKLLQDLVP GCNKVTGKAV MLDEIIIYVQ
301: SLQRQVEFLS MKLATVNPHL DFNNLSNLLP KDVHQTCGAM PNSVYSLEAS GVAPPYINQP SLHCVLPDGM EIHRSADLLG STLHQNVNTH QPLLAGFENS
401: PSQLGNFWED GLQNVSQMDI GHD
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.