Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7D01G257000.2 | Wheat | nucleus | 77.53 | 81.14 |
TraesCS7B01G152800.1 | Wheat | nucleus | 76.05 | 80.0 |
EES15330 | Sorghum | nucleus | 76.05 | 77.58 |
Zm00001d031561_P002 | Maize | nucleus | 72.84 | 75.45 |
TraesCS7A01G256200.3 | Wheat | nucleus | 70.62 | 72.04 |
HORVU7Hr1G052870.23 | Barley | nucleus | 69.88 | 72.01 |
Os09t0501600-01 | Rice | nucleus | 56.3 | 62.3 |
Os07t0193800-01 | Rice | endoplasmic reticulum | 20.74 | 40.38 |
Os06t0613500-01 | Rice | cytosol, nucleus | 16.3 | 37.08 |
Os04t0350700-01 | Rice | nucleus | 23.7 | 36.5 |
Os03t0802900-01 | Rice | nucleus | 23.21 | 35.47 |
Os03t0728900-00 | Rice | cytosol, nucleus | 22.72 | 34.07 |
Os09t0510500-01 | Rice | nucleus | 21.73 | 31.21 |
Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 22.72 | 29.77 |
Os02t0705500-01 | Rice | nucleus | 25.43 | 28.53 |
Os09t0474100-01 | Rice | nucleus | 30.12 | 28.5 |
Solyc09g057710.2.1 | Tomato | nucleus | 33.09 | 28.27 |
Os06t0275600-01 | Rice | cytosol, nucleus | 29.63 | 27.46 |
PGSC0003DMT400053639 | Potato | nucleus | 32.84 | 27.03 |
Os11t0442500-00 | Rice | nucleus | 24.69 | 26.67 |
Os01t0915600-01 | Rice | nucleus | 31.6 | 26.61 |
Os05t0103000-01 | Rice | nucleus | 20.49 | 24.48 |
GSMUA_Achr10P... | Banana | nucleus | 24.69 | 23.64 |
GSMUA_Achr7P22770_001 | Banana | nucleus | 24.94 | 22.85 |
Os08t0487700-00 | Rice | nucleus | 19.01 | 22.45 |
GSMUA_Achr4P16120_001 | Banana | nucleus | 24.2 | 21.44 |
GSMUA_Achr7P02770_001 | Banana | nucleus | 24.94 | 20.7 |
Os09t0474051-01 | Rice | plastid | 13.33 | 9.23 |
Protein Annotations
MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:4346087 | ProteinID:BAC75416.1 | ProteinID:BAF24203.1 |
ProteinID:BAT06330.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
EnsemblPlantsGene:Os08g0524800 | EnsemblPlants:Os08t0524800-01 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF169 |
UniProt:Q84QW1 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0000185CA1 | RefSeq:XP_015648582.1 | InterPro:bHLH_dom |
SEG:seg | : | : | : | : | : |
Description
basic helix-loop-helix protein 091Similar to TA1 protein (Fragment). (Os08t0524800-01)
Coordinates
chr8:+:26102849..26105352
Molecular Weight (calculated)
42386.4 Da
IEP (calculated)
6.675
GRAVY (calculated)
-0.559
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGRVGGDY ISSLLSSSPR LDFGVPVLDA IVAPGGGGGG GDCGLDKLCG DPGFAERAAR LSSFNNGGGG VGQRYGGAGA GLFGMPPPAP GDFAGGGSRE
101: ASSVSDPASS AMKDAAANAK KRKSTAAAAA AAKGKGKEPP VGEEKESDGK RCKTGNGEKE SSVKPKAEQA GSDSSVEDGG GGGQKQGKGK NAKPVEPPKD
201: YVHVRARRGQ ATDSHSLAER VRRERISQRM KVLQDLVPGC NKVIGKALML DEIINYVQSL QRQVEFLSMK LATVNPLDFS NLPTLLQKDM FQACGPSASS
301: VFSLESSNSA FRFAEQGDVF QQFAQNSMES QCTLNQLDLA LSQATNAAQY AFQDGTAGAN LQQRNFWEDD LQSVFHIENG QSQENGVSAP NFHGQQQAGH
401: MKMEF
101: ASSVSDPASS AMKDAAANAK KRKSTAAAAA AAKGKGKEPP VGEEKESDGK RCKTGNGEKE SSVKPKAEQA GSDSSVEDGG GGGQKQGKGK NAKPVEPPKD
201: YVHVRARRGQ ATDSHSLAER VRRERISQRM KVLQDLVPGC NKVIGKALML DEIINYVQSL QRQVEFLSMK LATVNPLDFS NLPTLLQKDM FQACGPSASS
301: VFSLESSNSA FRFAEQGDVF QQFAQNSMES QCTLNQLDLA LSQATNAAQY AFQDGTAGAN LQQRNFWEDD LQSVFHIENG QSQENGVSAP NFHGQQQAGH
401: MKMEF
001: MDNELFMNTE FPPPPEMATH FEHQQSSSSA MMLNWALMDP NPHQDSSFLW EKSTEQQQQQ SIFDSALSSL VSSPTPSNSN FSGGGGDGFL IRELIGKLGN
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQYQMF SEEDLQSIVG MGVAENPNNE SQHMKIEL
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQYQMF SEEDLQSIVG MGVAENPNNE SQHMKIEL
Arabidopsis Description
BHLH78Transcription factor bHLH78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.