Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14175 | Sorghum | nucleus | 69.9 | 73.72 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 66.99 | 70.41 |
| Zm00001d031665_P001 | Maize | mitochondrion | 66.02 | 64.76 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 67.96 | 62.69 |
| TraesCS7B01G161700.3 | Wheat | nucleus, plastid | 67.31 | 62.09 |
| Os09t0510500-01 | Rice | nucleus | 56.31 | 61.7 |
| TraesCS7A01G263700.1 | Wheat | nucleus | 59.55 | 59.35 |
| Zm00001d049870_P001 | Maize | nucleus | 60.84 | 58.93 |
| VIT_17s0000g00430.t01 | Wine grape | nucleus | 41.42 | 36.68 |
| PGSC0003DMT400069568 | Potato | nucleus | 33.66 | 36.62 |
| Solyc06g072520.1.1 | Tomato | nucleus, plastid | 33.98 | 36.33 |
| Solyc03g097820.1.1 | Tomato | nucleus | 36.89 | 34.55 |
| PGSC0003DMT400051137 | Potato | nucleus | 37.54 | 34.32 |
| CDY45806 | Canola | nucleus | 32.36 | 34.13 |
| Bra022753.1-P | Field mustard | nucleus | 32.36 | 33.67 |
| KRH41084 | Soybean | nucleus | 36.89 | 33.63 |
| KRH59766 | Soybean | nucleus | 37.22 | 33.63 |
| AT5G50915.2 | Thale cress | nucleus | 31.07 | 33.57 |
| CDX84885 | Canola | nucleus | 32.04 | 33.33 |
| KRH63842 | Soybean | nucleus | 36.89 | 32.95 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 22.01 | 32.69 |
| KRH54121 | Soybean | nucleus | 36.57 | 32.38 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 27.18 | 31.11 |
| Os04t0350700-01 | Rice | nucleus | 26.21 | 30.8 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 17.48 | 30.34 |
| Os05t0103000-01 | Rice | nucleus | 31.07 | 28.32 |
| Os03t0802900-01 | Rice | nucleus | 23.95 | 27.92 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 24.27 | 27.78 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 31.72 | 25.32 |
| Os09t0501600-01 | Rice | nucleus | 28.16 | 23.77 |
| Os02t0705500-01 | Rice | nucleus | 26.86 | 22.99 |
| Os08t0524800-01 | Rice | nucleus | 29.77 | 22.72 |
| Os11t0442500-00 | Rice | nucleus | 26.86 | 22.13 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 28.8 | 20.37 |
| Os01t0915600-01 | Rice | nucleus | 28.16 | 18.09 |
| Os09t0474100-01 | Rice | nucleus | 24.27 | 17.52 |
| Os08t0487700-00 | Rice | nucleus | 18.12 | 16.33 |
| Os09t0474051-01 | Rice | plastid | 12.3 | 6.5 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A0P0XIW1 | ProteinID:BAT06452.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlantsGene:Os08g0536800 | EnsemblPlants:Os08t0536800-01 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF302 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000393AF8A | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
basic helix-loop-helix protein 080Similar to TA1 protein (Fragment). (Os08t0536800-01)
Coordinates
chr8:-:26841066..26843300
Molecular Weight (calculated)
34082.1 Da
IEP (calculated)
8.095
GRAVY (calculated)
-0.655
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: PLPRRSSTPL FSEETKLPIN NTKKFQTQRV QQQQSNGRLL TTNDPNISSF FLYNHSHGSQ APQPANAAAA AIVEDASLES SVSAVLDTSP SVDRKRKAAE
101: DSAHSKDSCK DGKSRRGKKA SKEVEEKSTT EDEPPKGYIH VRARRGQATD SHSLAERVRR ERISERMRML QALVPGCDKV TGKALILDEI INYVQSLQNQ
201: VEFLSMRIAS MSPVLYGFGM DSDGLHDQKI GGMFQEALAM PNPVLNQSSP APSQAIMDTT STTSYSLQSQ HGAISFSQDN GSYLMQAVGE PRQQEMLNQL
301: VFNNMCSFQ
101: DSAHSKDSCK DGKSRRGKKA SKEVEEKSTT EDEPPKGYIH VRARRGQATD SHSLAERVRR ERISERMRML QALVPGCDKV TGKALILDEI INYVQSLQNQ
201: VEFLSMRIAS MSPVLYGFGM DSDGLHDQKI GGMFQEALAM PNPVLNQSSP APSQAIMDTT STTSYSLQSQ HGAISFSQDN GSYLMQAVGE PRQQEMLNQL
301: VFNNMCSFQ
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.