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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88966 Canola nucleus 10.09 17.77
CDX98249 Canola nucleus 8.38 17.5
CDY06074 Canola nucleus 10.26 16.85
Bra014603.1-P Field mustard nucleus 9.91 16.76
Bra007358.1-P Field mustard nucleus 10.09 16.48
CDX67710 Canola nucleus 8.89 16.15
CDY53497 Canola nucleus 8.38 15.86
Bra003300.1-P Field mustard nucleus 8.72 15.84
CDX71994 Canola nucleus 9.74 15.79
CDY47665 Canola cytosol 6.84 15.56
Bra004679.1-P Field mustard nucleus 8.03 15.56
CDX79883 Canola nucleus 8.03 15.56
CDY47666 Canola endoplasmic reticulum, extracellular 3.59 15.22
AT2G42300.1 Thale cress nucleus 8.38 14.98
Os08t0487700-00 Rice nucleus 8.55 14.58
Os07t0193800-01 Rice endoplasmic reticulum 5.13 14.42
Os11t0442500-00 Rice nucleus 9.23 14.4
Os06t0613500-01 Rice cytosol, nucleus 4.27 14.04
Os03t0802900-01 Rice nucleus 6.32 13.96
Os09t0501600-01 Rice nucleus 8.72 13.93
AT3G57800.1 Thale cress nucleus 9.74 13.38
Os08t0524800-01 Rice nucleus 9.23 13.33
Os02t0705500-01 Rice nucleus 8.03 13.02
Os03t0728900-00 Rice cytosol, nucleus 5.98 12.96
Os06t0275600-01 Rice cytosol, nucleus 9.4 12.59
Os08t0536800-01 Rice cytosol, nucleus, plastid 6.5 12.3
Os04t0350700-01 Rice nucleus 5.47 12.17
Os01t0915600-01 Rice nucleus 9.4 11.43
Os09t0510500-01 Rice nucleus 5.47 11.35
Os09t0474100-01 Rice nucleus 7.69 10.51
Os05t0103000-01 Rice nucleus 5.81 10.03
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1UniProt:A0A0P0XPC3ProteinID:BAT08590.1InterPro:DYW_domGO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004519GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0009451GO:GO:0009987GO:GO:0016787GO:GO:0043231
GO:GO:0046983GO:GO:0090305InterPro:IPR002885InterPro:IPR011990EnsemblPlantsGene:Os09g0474051EnsemblPlants:Os09t0474051-01
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFAM:PF14432PFscan:PS51375PANTHER:PTHR24015
PANTHER:PTHR24015:SF445InterPro:Pentatricopeptide_repeatTIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI000393BAE8SEG:seg
Description
Hypothetical conserved gene. (Os09t0474051-01)
Coordinates
chr9:+:18134399..18136393
Molecular Weight (calculated)
64062.3 Da
IEP (calculated)
7.499
GRAVY (calculated)
-0.066
Length
585 amino acids
Sequence
(BLAST)
001: MPPPTVPFFL TSTTLAAAAA KPQRPGPPSP PAQKQQPREA RDGSRDACAS YTARMRLNPQ LALRLFDHLL RSGADPDHVA YALALGRCAR GRDRRAAAQL
101: HAHAAKRGAA SHRRVCNGLI HAYAVCGSLL DARKVFDRGH EGDAVAWNSL LRGYAAAGDV NALREFFVGM QARDTVSWNT IIAWCVENGE YEEAIAVFRE
201: MLASMECLPD RVTLVSVISA ITYLGALAQG LWAHAYVCRK GIEVEERLSS ALINMYSKCG CIEGAVHVFE NLGAQMNVDT WNAMLAGFTA NGCSEKALEL
301: FARMEITGLV PNKITFNTVL NACSHGGFVE EGMGCFERMT KVYGIEPDIA HYGCMVDLFC RAGLFDKAEK MIQMMPMKPD AAVWKALVGA CKTHRNFELG
401: RKAGHMLIEA APNDHAGYVL LSNIYALDGN WTGVHKVRKL MLDRGVQKVP GSSSIEIDGV IHEFISGDKS HSSKEDIYEM LSEMCQQLKV AGYVPDTSHV
501: LLDIDDEDVK ESSLALHSEK LAIAFGLIST APGTPIRIAK NLRVCGDCHN AVKLLSKIYG RCIIVRDANR FHHFREGSCS CGDFW
Best Arabidopsis Sequence Match ( AT5G48910.1 )
(BLAST)
001: MNPTQTLFSP GGNSPASSPA SHPSSLFPQI NNCRTIRDLS QIHAVFIKSG QMRDTLAAAE ILRFCATSDL HHRDLDYAHK IFNQMPQRNC FSWNTIIRGF
101: SESDEDKALI AITLFYEMMS DEFVEPNRFT FPSVLKACAK TGKIQEGKQI HGLALKYGFG GDEFVMSNLV RMYVMCGFMK DARVLFYKNI IEKDMVVMTD
201: RRKRDGEIVL WNVMIDGYMR LGDCKAARML FDKMRQRSVV SWNTMISGYS LNGFFKDAVE VFREMKKGDI RPNYVTLVSV LPAISRLGSL ELGEWLHLYA
301: EDSGIRIDDV LGSALIDMYS KCGIIEKAIH VFERLPRENV ITWSAMINGF AIHGQAGDAI DCFCKMRQAG VRPSDVAYIN LLTACSHGGL VEEGRRYFSQ
401: MVSVDGLEPR IEHYGCMVDL LGRSGLLDEA EEFILNMPIK PDDVIWKALL GACRMQGNVE MGKRVANILM DMVPHDSGAY VALSNMYASQ GNWSEVSEMR
501: LRMKEKDIRK DPGCSLIDID GVLHEFVVED DSHPKAKEIN SMLVEISDKL RLAGYRPITT QVLLNLEEED KENVLHYHSE KIATAFGLIS TSPGKPIRIV
601: KNLRICEDCH SSIKLISKVY KRKITVRDRK RFHHFQDGSC SCMDYW
Arabidopsis Description
PCMP-H38Pentatricopeptide repeat-containing protein At5g48910 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI80]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.