Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX88966 | Canola | nucleus | 10.09 | 17.77 |
CDX98249 | Canola | nucleus | 8.38 | 17.5 |
CDY06074 | Canola | nucleus | 10.26 | 16.85 |
Bra014603.1-P | Field mustard | nucleus | 9.91 | 16.76 |
Bra007358.1-P | Field mustard | nucleus | 10.09 | 16.48 |
CDX67710 | Canola | nucleus | 8.89 | 16.15 |
CDY53497 | Canola | nucleus | 8.38 | 15.86 |
Bra003300.1-P | Field mustard | nucleus | 8.72 | 15.84 |
CDX71994 | Canola | nucleus | 9.74 | 15.79 |
CDY47665 | Canola | cytosol | 6.84 | 15.56 |
Bra004679.1-P | Field mustard | nucleus | 8.03 | 15.56 |
CDX79883 | Canola | nucleus | 8.03 | 15.56 |
CDY47666 | Canola | endoplasmic reticulum, extracellular | 3.59 | 15.22 |
AT2G42300.1 | Thale cress | nucleus | 8.38 | 14.98 |
Os08t0487700-00 | Rice | nucleus | 8.55 | 14.58 |
Os07t0193800-01 | Rice | endoplasmic reticulum | 5.13 | 14.42 |
Os11t0442500-00 | Rice | nucleus | 9.23 | 14.4 |
Os06t0613500-01 | Rice | cytosol, nucleus | 4.27 | 14.04 |
Os03t0802900-01 | Rice | nucleus | 6.32 | 13.96 |
Os09t0501600-01 | Rice | nucleus | 8.72 | 13.93 |
AT3G57800.1 | Thale cress | nucleus | 9.74 | 13.38 |
Os08t0524800-01 | Rice | nucleus | 9.23 | 13.33 |
Os02t0705500-01 | Rice | nucleus | 8.03 | 13.02 |
Os03t0728900-00 | Rice | cytosol, nucleus | 5.98 | 12.96 |
Os06t0275600-01 | Rice | cytosol, nucleus | 9.4 | 12.59 |
Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 6.5 | 12.3 |
Os04t0350700-01 | Rice | nucleus | 5.47 | 12.17 |
Os01t0915600-01 | Rice | nucleus | 9.4 | 11.43 |
Os09t0510500-01 | Rice | nucleus | 5.47 | 11.35 |
Os09t0474100-01 | Rice | nucleus | 7.69 | 10.51 |
Os05t0103000-01 | Rice | nucleus | 5.81 | 10.03 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A0P0XPC3 | ProteinID:BAT08590.1 | InterPro:DYW_dom | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 |
GO:GO:0046983 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | EnsemblPlantsGene:Os09g0474051 | EnsemblPlants:Os09t0474051-01 |
PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF14432 | PFscan:PS51375 | PANTHER:PTHR24015 |
PANTHER:PTHR24015:SF445 | InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000393BAE8 | SEG:seg |
Description
Hypothetical conserved gene. (Os09t0474051-01)
Coordinates
chr9:+:18134399..18136393
Molecular Weight (calculated)
64062.3 Da
IEP (calculated)
7.499
GRAVY (calculated)
-0.066
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPTVPFFL TSTTLAAAAA KPQRPGPPSP PAQKQQPREA RDGSRDACAS YTARMRLNPQ LALRLFDHLL RSGADPDHVA YALALGRCAR GRDRRAAAQL
101: HAHAAKRGAA SHRRVCNGLI HAYAVCGSLL DARKVFDRGH EGDAVAWNSL LRGYAAAGDV NALREFFVGM QARDTVSWNT IIAWCVENGE YEEAIAVFRE
201: MLASMECLPD RVTLVSVISA ITYLGALAQG LWAHAYVCRK GIEVEERLSS ALINMYSKCG CIEGAVHVFE NLGAQMNVDT WNAMLAGFTA NGCSEKALEL
301: FARMEITGLV PNKITFNTVL NACSHGGFVE EGMGCFERMT KVYGIEPDIA HYGCMVDLFC RAGLFDKAEK MIQMMPMKPD AAVWKALVGA CKTHRNFELG
401: RKAGHMLIEA APNDHAGYVL LSNIYALDGN WTGVHKVRKL MLDRGVQKVP GSSSIEIDGV IHEFISGDKS HSSKEDIYEM LSEMCQQLKV AGYVPDTSHV
501: LLDIDDEDVK ESSLALHSEK LAIAFGLIST APGTPIRIAK NLRVCGDCHN AVKLLSKIYG RCIIVRDANR FHHFREGSCS CGDFW
101: HAHAAKRGAA SHRRVCNGLI HAYAVCGSLL DARKVFDRGH EGDAVAWNSL LRGYAAAGDV NALREFFVGM QARDTVSWNT IIAWCVENGE YEEAIAVFRE
201: MLASMECLPD RVTLVSVISA ITYLGALAQG LWAHAYVCRK GIEVEERLSS ALINMYSKCG CIEGAVHVFE NLGAQMNVDT WNAMLAGFTA NGCSEKALEL
301: FARMEITGLV PNKITFNTVL NACSHGGFVE EGMGCFERMT KVYGIEPDIA HYGCMVDLFC RAGLFDKAEK MIQMMPMKPD AAVWKALVGA CKTHRNFELG
401: RKAGHMLIEA APNDHAGYVL LSNIYALDGN WTGVHKVRKL MLDRGVQKVP GSSSIEIDGV IHEFISGDKS HSSKEDIYEM LSEMCQQLKV AGYVPDTSHV
501: LLDIDDEDVK ESSLALHSEK LAIAFGLIST APGTPIRIAK NLRVCGDCHN AVKLLSKIYG RCIIVRDANR FHHFREGSCS CGDFW
001: MNPTQTLFSP GGNSPASSPA SHPSSLFPQI NNCRTIRDLS QIHAVFIKSG QMRDTLAAAE ILRFCATSDL HHRDLDYAHK IFNQMPQRNC FSWNTIIRGF
101: SESDEDKALI AITLFYEMMS DEFVEPNRFT FPSVLKACAK TGKIQEGKQI HGLALKYGFG GDEFVMSNLV RMYVMCGFMK DARVLFYKNI IEKDMVVMTD
201: RRKRDGEIVL WNVMIDGYMR LGDCKAARML FDKMRQRSVV SWNTMISGYS LNGFFKDAVE VFREMKKGDI RPNYVTLVSV LPAISRLGSL ELGEWLHLYA
301: EDSGIRIDDV LGSALIDMYS KCGIIEKAIH VFERLPRENV ITWSAMINGF AIHGQAGDAI DCFCKMRQAG VRPSDVAYIN LLTACSHGGL VEEGRRYFSQ
401: MVSVDGLEPR IEHYGCMVDL LGRSGLLDEA EEFILNMPIK PDDVIWKALL GACRMQGNVE MGKRVANILM DMVPHDSGAY VALSNMYASQ GNWSEVSEMR
501: LRMKEKDIRK DPGCSLIDID GVLHEFVVED DSHPKAKEIN SMLVEISDKL RLAGYRPITT QVLLNLEEED KENVLHYHSE KIATAFGLIS TSPGKPIRIV
601: KNLRICEDCH SSIKLISKVY KRKITVRDRK RFHHFQDGSC SCMDYW
101: SESDEDKALI AITLFYEMMS DEFVEPNRFT FPSVLKACAK TGKIQEGKQI HGLALKYGFG GDEFVMSNLV RMYVMCGFMK DARVLFYKNI IEKDMVVMTD
201: RRKRDGEIVL WNVMIDGYMR LGDCKAARML FDKMRQRSVV SWNTMISGYS LNGFFKDAVE VFREMKKGDI RPNYVTLVSV LPAISRLGSL ELGEWLHLYA
301: EDSGIRIDDV LGSALIDMYS KCGIIEKAIH VFERLPRENV ITWSAMINGF AIHGQAGDAI DCFCKMRQAG VRPSDVAYIN LLTACSHGGL VEEGRRYFSQ
401: MVSVDGLEPR IEHYGCMVDL LGRSGLLDEA EEFILNMPIK PDDVIWKALL GACRMQGNVE MGKRVANILM DMVPHDSGAY VALSNMYASQ GNWSEVSEMR
501: LRMKEKDIRK DPGCSLIDID GVLHEFVVED DSHPKAKEIN SMLVEISDKL RLAGYRPITT QVLLNLEEED KENVLHYHSE KIATAFGLIS TSPGKPIRIV
601: KNLRICEDCH SSIKLISKVY KRKITVRDRK RFHHFQDGSC SCMDYW
Arabidopsis Description
PCMP-H38Pentatricopeptide repeat-containing protein At5g48910 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI80]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.