Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004679.1-P | Field mustard | nucleus | 96.36 | 96.36 |
| CDY53497 | Canola | nucleus | 90.4 | 88.35 |
| AT2G42300.1 | Thale cress | nucleus | 73.51 | 67.89 |
| CDX88966 | Canola | nucleus | 65.56 | 59.64 |
| CDX67710 | Canola | nucleus | 62.91 | 59.01 |
| CDX98249 | Canola | nucleus | 54.64 | 58.93 |
| CDX71994 | Canola | nucleus | 68.21 | 57.06 |
| CDY06074 | Canola | nucleus | 65.89 | 55.9 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 25.5 | 55.8 |
| CDY47665 | Canola | cytosol | 42.72 | 50.19 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 55.96 | 46.43 |
| KRH71879 | Soybean | nucleus | 53.97 | 46.05 |
| KRG95332 | Soybean | nucleus | 54.64 | 45.08 |
| KRH33022 | Soybean | nucleus | 52.65 | 44.54 |
| PGSC0003DMT400021130 | Potato | nucleus | 51.66 | 43.33 |
| Solyc10g079070.1.1 | Tomato | nucleus | 50.66 | 42.38 |
| KRH67006 | Soybean | nucleus | 53.31 | 40.25 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 46.69 | 38.63 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 39.4 | 37.9 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 48.34 | 37.73 |
| TraesCS7A01G403900.1 | Wheat | cytosol | 19.21 | 37.66 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 39.4 | 37.66 |
| HORVU7Hr1G094690.1 | Barley | plastid | 30.46 | 37.25 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 42.38 | 34.97 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 33.11 | 34.48 |
| Zm00001d046759_P001 | Maize | plastid | 37.75 | 32.02 |
| CDX76288 | Canola | nucleus | 26.49 | 32.0 |
| Zm00001d036807_P001 | Maize | nucleus | 38.08 | 31.08 |
| CDY72360 | Canola | cytosol | 15.23 | 30.67 |
| CDY17466 | Canola | nucleus | 27.81 | 30.22 |
| CDY08308 | Canola | nucleus | 28.48 | 29.45 |
| OQU76702 | Sorghum | nucleus | 38.74 | 28.54 |
| CDX75440 | Canola | nucleus | 30.79 | 28.27 |
| CDY18099 | Canola | nucleus | 20.86 | 28.25 |
| CDY25986 | Canola | plastid | 20.2 | 27.98 |
| CDY05670 | Canola | nucleus | 23.84 | 27.91 |
| CDY64034 | Canola | nucleus | 28.15 | 27.69 |
| CDX69067 | Canola | nucleus | 30.79 | 27.35 |
| CDX86296 | Canola | nucleus | 24.5 | 27.31 |
| CDY45806 | Canola | nucleus | 26.49 | 27.3 |
| CDX93427 | Canola | nucleus | 23.84 | 26.87 |
| CDY37979 | Canola | nucleus | 23.51 | 26.69 |
| CDX84885 | Canola | nucleus | 26.16 | 26.6 |
| CDX87255 | Canola | nucleus, plastid | 23.84 | 25.71 |
| CDY33821 | Canola | mitochondrion, plastid | 16.56 | 25.51 |
| CDX77488 | Canola | nucleus | 27.48 | 25.23 |
| CDY56230 | Canola | nucleus | 27.81 | 25.23 |
| CDY31048 | Canola | nucleus | 25.5 | 24.52 |
| CDX85122 | Canola | nucleus | 26.82 | 24.47 |
| CDY20659 | Canola | nucleus | 25.83 | 23.42 |
| CDY63738 | Canola | nucleus | 25.5 | 22.51 |
| CDY22605 | Canola | nucleus | 25.5 | 21.81 |
| CDY53834 | Canola | nucleus | 24.83 | 21.61 |
| CDY61581 | Canola | plastid | 12.91 | 21.31 |
| CDY51061 | Canola | nucleus | 29.8 | 20.79 |
| CDY28061 | Canola | nucleus | 31.13 | 20.75 |
| CDY35923 | Canola | nucleus, plastid | 30.46 | 20.54 |
| CDY45835 | Canola | nucleus | 30.46 | 20.31 |
| CDY61420 | Canola | extracellular | 8.94 | 19.85 |
| CDX95974 | Canola | nucleus | 31.13 | 19.62 |
| CDY33568 | Canola | nucleus | 31.13 | 19.5 |
| CDX81575 | Canola | nucleus | 30.46 | 19.37 |
| CDY57925 | Canola | nucleus | 25.5 | 19.35 |
| CDX86297 | Canola | nucleus | 30.79 | 18.98 |
| CDX85347 | Canola | nucleus | 30.79 | 18.94 |
| Os09t0474051-01 | Rice | plastid | 15.56 | 8.03 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078CXM1 | EnsemblPlants:CDX79883 | ProteinID:CDX79883 |
| ProteinID:CDX79883.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00132735001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF112 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE6E6F | InterPro:bHLH_dom | SEG:seg |
Description
BnaA05g02730D
Coordinates
chrLK031819:-:690533..693517
Molecular Weight (calculated)
33652.6 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.614
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGVSSGAGP YRESPMTGLE SLNFIDEIQQ LAATFPPENT GSFTALLEMP ATQAVELFTS SSQAAGNTAP PTLHPLRRLN FPPDLAAVIA AEQNGNFSGE
101: SSSFGIRVKS EPEETDSSQR FVSNQNHNKR KERGKKKVKS SMKKSKSSDE EAEKLPYVHV RARRGQATDN HSLAERARRE KINARMKLLQ ELVPGCDKIQ
201: GTALVLDEII NHVQSLQHQV EMLSMRLAAV NPRIDFNLDS LLASQNSFIM DGSFTGEFHH QLQQWPLDGY HQTEWGREED HHEASFLMGS ATLHPNQVKM
301: EL
101: SSSFGIRVKS EPEETDSSQR FVSNQNHNKR KERGKKKVKS SMKKSKSSDE EAEKLPYVHV RARRGQATDN HSLAERARRE KINARMKLLQ ELVPGCDKIQ
201: GTALVLDEII NHVQSLQHQV EMLSMRLAAV NPRIDFNLDS LLASQNSFIM DGSFTGEFHH QLQQWPLDGY HQTEWGREED HHEASFLMGS ATLHPNQVKM
301: EL
001: MDLTQGFRAR SGVVGPVAGL ESLNFSDEFR HLVTTMPPET TGGSFTALLE MPVTQAMELL HFPDSSSSQA RTVTSGDISP TTLHPFGALT FPSNSLLLDR
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
Arabidopsis Description
BHLH48Transcription factor bHLH48 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ02]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.