Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P19330_001 | Banana | nucleus | 68.85 | 65.12 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 63.66 | 63.84 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 26.23 | 53.93 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 42.62 | 49.68 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 16.39 | 49.59 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 42.08 | 48.73 |
| CDX98249 | Canola | nucleus | 36.89 | 48.21 |
| TraesCS7A01G403900.1 | Wheat | cytosol | 19.95 | 47.4 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 46.99 | 47.25 |
| HORVU7Hr1G094690.1 | Barley | plastid | 31.15 | 46.15 |
| CDX67710 | Canola | nucleus | 39.07 | 44.41 |
| Zm00001d036807_P001 | Maize | nucleus | 44.54 | 44.05 |
| Bra003300.1-P | Field mustard | nucleus | 38.52 | 43.79 |
| AT2G42300.1 | Thale cress | nucleus | 39.07 | 43.73 |
| Zm00001d046759_P001 | Maize | plastid | 42.35 | 43.54 |
| PGSC0003DMT400021130 | Potato | nucleus | 42.35 | 43.06 |
| CDY53497 | Canola | nucleus | 36.34 | 43.04 |
| KRG95332 | Soybean | nucleus | 42.9 | 42.9 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 33.88 | 42.76 |
| Bra004679.1-P | Field mustard | nucleus | 35.25 | 42.72 |
| CDX79883 | Canola | nucleus | 34.97 | 42.38 |
| Solyc10g079070.1.1 | Tomato | nucleus | 41.8 | 42.38 |
| Bra007358.1-P | Field mustard | nucleus | 40.71 | 41.62 |
| CDX88966 | Canola | nucleus | 37.7 | 41.57 |
| CDY06074 | Canola | nucleus | 40.16 | 41.29 |
| KRH33022 | Soybean | nucleus | 39.62 | 40.62 |
| CDX71994 | Canola | nucleus | 39.89 | 40.44 |
| KRH71879 | Soybean | nucleus | 39.07 | 40.4 |
| OQU76702 | Sorghum | nucleus | 45.08 | 40.24 |
| Bra014603.1-P | Field mustard | nucleus | 37.98 | 40.17 |
| KRH67006 | Soybean | nucleus | 42.9 | 39.25 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 17.21 | 38.41 |
| CDY47665 | Canola | cytosol | 26.78 | 38.13 |
| GSMUA_Achr10P... | Banana | nucleus | 18.31 | 36.41 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 18.03 | 35.87 |
| AT3G57800.1 | Thale cress | nucleus | 40.71 | 34.98 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 13.11 | 34.78 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 20.49 | 33.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.77 | 31.41 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 20.77 | 29.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.68 | 29.33 |
| GSMUA_Achr10P... | Banana | nucleus | 21.31 | 28.16 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 24.32 | 28.08 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 20.77 | 26.95 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 19.67 | 26.18 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 22.13 | 25.63 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 24.86 | 25.14 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 21.04 | 24.14 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 24.86 | 23.88 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 19.95 | 23.86 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 21.58 | 23.51 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 19.95 | 23.4 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 21.86 | 23.05 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 25.96 | 22.95 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 22.95 | 22.89 |
| GSMUA_Achr10P... | Banana | nucleus | 23.5 | 21.39 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 24.59 | 21.33 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 24.04 | 20.51 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 28.96 | 20.31 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 27.87 | 20.28 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 26.23 | 20.08 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 23.77 | 19.95 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 21.04 | 19.9 |
| GSMUA_Achr10P... | Banana | nucleus | 22.4 | 19.39 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 24.04 | 19.09 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 23.5 | 18.82 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 28.69 | 18.42 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 21.86 | 18.1 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 22.68 | 17.01 |
| GSMUA_Achr10P... | Banana | mitochondrion | 25.14 | 13.98 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr7G06330_001 | EnsemblPlants:GSMUA_Achr7P06330_001 | EnsemblPlants:GSMUA_Achr7T06330_001 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M0TF73 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF112 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000294969C | InterPro:bHLH_dom | SEG:seg |
Description
Transcription factor bHLH48 [Source:GMGC_GENE;Acc:GSMUA_Achr7G06330_001]
Coordinates
chr7:-:4674996..4679242
Molecular Weight (calculated)
38639.4 Da
IEP (calculated)
6.865
GRAVY (calculated)
-0.308
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAGSYGVG TGNSGAYMTE IAEPIRFDEE IRSLIQARFD APPVSGGSFT ALLGLSANQA VGLLHEPGAG EVSASAAASS PTGLGHPLGW SPTFPSNAGL
101: AERAASFPVF AAADSPASSS GGGPSPQLKA EPSDSDSSPP LPVPIDKPRR PAKRKDCEKQ KAKGPAKKLK TAEEHTEDDQ LPYVHVRARR GQATDSHSLA
201: ERARREKINA RMKLLQELVP GCSKITGTAL VLDEIINHVQ SLQRQVEFLS MRLAAVTPRI DFGGLDSFLM AECGPLAASN GRGEVALDPV SWSSDPAPGT
301: GQRTDLRPSQ QSSTAWVYPY GLINHGTSLF GYGAANSVCM ILFNSSYPVL YKFSCSYSNN NFDLCS
101: AERAASFPVF AAADSPASSS GGGPSPQLKA EPSDSDSSPP LPVPIDKPRR PAKRKDCEKQ KAKGPAKKLK TAEEHTEDDQ LPYVHVRARR GQATDSHSLA
201: ERARREKINA RMKLLQELVP GCSKITGTAL VLDEIINHVQ SLQRQVEFLS MRLAAVTPRI DFGGLDSFLM AECGPLAASN GRGEVALDPV SWSSDPAPGT
301: GQRTDLRPSQ QSSTAWVYPY GLINHGTSLF GYGAANSVCM ILFNSSYPVL YKFSCSYSNN NFDLCS
001: MDLTGGFGAR SGGVGPCREP IGLESLHLGD EFRQLVTTLP PENPGGSFTA LLELPPTQAV ELLHFTDSSS SQQAAVTGIG GEIPPPLHSF GGTLAFPSNS
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
Arabidopsis Description
BHLH60Transcription factor bHLH60 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.