Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P24960_001 | Banana | nucleus | 32.85 | 49.46 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 21.3 | 48.76 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 25.63 | 43.29 |
| GSMUA_Achr10P... | Banana | nucleus | 25.99 | 39.13 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 26.71 | 32.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.8 | 31.82 |
| CDY45806 | Canola | nucleus | 33.21 | 31.4 |
| Bra022753.1-P | Field mustard | nucleus | 33.57 | 31.31 |
| AT5G50915.2 | Thale cress | nucleus | 32.13 | 31.12 |
| CDX84885 | Canola | nucleus | 33.21 | 30.98 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 30.32 | 29.79 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 29.24 | 29.45 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 25.99 | 27.91 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 31.05 | 27.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.08 | 26.5 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 28.52 | 25.0 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 31.41 | 24.03 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 25.99 | 23.53 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 32.85 | 23.51 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 29.96 | 21.78 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 22.74 | 21.72 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 28.52 | 21.64 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 28.16 | 21.31 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 25.63 | 21.13 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 32.13 | 21.09 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 26.35 | 21.04 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 23.47 | 20.83 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 31.05 | 20.77 |
| GSMUA_Achr10P... | Banana | nucleus | 29.96 | 20.65 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 28.52 | 20.41 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 23.47 | 20.38 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 37.91 | 20.11 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 29.96 | 19.35 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 25.27 | 19.07 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 32.49 | 18.83 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 33.94 | 18.69 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 29.24 | 18.58 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 27.8 | 16.85 |
| GSMUA_Achr10P... | Banana | nucleus | 25.63 | 16.78 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 34.3 | 16.67 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 26.35 | 16.52 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 27.08 | 16.27 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 27.08 | 15.37 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.41 | 13.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P18410_001 | EnsemblPlants:GSMUA_Achr10T18410_001 | EnsemblPlantsGene:GSMUA_Achr10G18410_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002961F1F | UniProt:M0RJB6 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G18410_001]
Coordinates
chr10:-:25138053..25139225
Molecular Weight (calculated)
30437.1 Da
IEP (calculated)
8.716
GRAVY (calculated)
-0.487
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSHWDSAC VSKTTAEMLL LMPQQQVAVA AAAAAVTDFD SCSSLDTGTD APSADGVIVS SPLSSELHES KKVQNQNQHG RVDHKRKTKD EASLVTGESV
101: GIRDGKSKKQ KRPKGGLKIT EELRSSSDGY VHVRARRGQA TDNHSLSERV RRKKISERMK MLQGLVPGCD KVTGKALILD EIINYVQCLQ NQVEFLSMKI
201: ASLSPVLYDF DVGFADCINQ PQKVITRSIP QPLSYVDQMN HLQAKAFDSG TTTFSQVWSL TQLYPNQEHN AGSKSWT
101: GIRDGKSKKQ KRPKGGLKIT EELRSSSDGY VHVRARRGQA TDNHSLSERV RRKKISERMK MLQGLVPGCD KVTGKALILD EIINYVQCLQ NQVEFLSMKI
201: ASLSPVLYDF DVGFADCINQ PQKVITRSIP QPLSYVDQMN HLQAKAFDSG TTTFSQVWSL TQLYPNQEHN AGSKSWT
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.