Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P09170_001 | Banana | nucleus | 21.63 | 50.41 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 25.18 | 43.29 |
| GSMUA_Achr10P... | Banana | nucleus | 24.82 | 38.04 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 23.4 | 35.87 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.43 | 34.3 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 31.56 | 32.96 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 25.53 | 31.86 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 29.08 | 31.78 |
| GSMUA_Achr10P... | Banana | nucleus | 29.79 | 30.32 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 26.95 | 27.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.6 | 26.5 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 28.37 | 25.32 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 28.01 | 24.92 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 28.01 | 23.51 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 30.14 | 23.48 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 25.18 | 22.76 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 24.47 | 22.55 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 28.72 | 22.07 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 28.37 | 21.92 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 26.6 | 21.61 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 21.99 | 21.38 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 26.95 | 20.77 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 23.4 | 20.69 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 30.14 | 20.53 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 27.66 | 20.47 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 30.5 | 20.38 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 27.66 | 20.16 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 27.3 | 19.9 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 32.98 | 19.46 |
| GSMUA_Achr10P... | Banana | nucleus | 27.66 | 19.4 |
| GSMUA_Achr10P... | Banana | nucleus | 29.08 | 19.39 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 35.11 | 18.97 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 30.5 | 18.66 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 28.72 | 18.58 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 29.08 | 18.55 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 32.62 | 18.29 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 26.95 | 17.72 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 28.37 | 17.51 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 34.04 | 16.84 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 29.08 | 16.8 |
| GSMUA_Achr10P... | Banana | mitochondrion | 27.66 | 11.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P01040_001 | EnsemblPlants:GSMUA_Achr9T01040_001 | EnsemblPlantsGene:GSMUA_Achr9G01040_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000296B3AA | UniProt:M0TWG1 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G01040_001]
Coordinates
chr9:+:784536..785622
Molecular Weight (calculated)
31343.8 Da
IEP (calculated)
7.314
GRAVY (calculated)
-0.286
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSCQDYHL ILDSACLSNM EMPICPQHLG EIDCYPWFEA NPKISATDAR TQVTGSSTSD DCSRAPCIGR SPVLDEPQGD EIPRSPPGCA ERKRKPSTAG
101: ARLITGKSQV HVHACGIWFP WTVHSSLLLP HDLLHEIGKK KPKVDGKKAS EPPVDVIHVR ARRGEATDSH SLAERVRRKK ISERMDVLQG LVPGCHQMKG
201: KALILDEIIN YVRSLQNQVE FLSTKLALLS PVLHDLGYLS GQPEVGEEPF LPLILVVFFR RLYIIHYNLI PDDTRIDQSG SG
101: ARLITGKSQV HVHACGIWFP WTVHSSLLLP HDLLHEIGKK KPKVDGKKAS EPPVDVIHVR ARRGEATDSH SLAERVRRKK ISERMDVLQG LVPGCHQMKG
201: KALILDEIIN YVRSLQNQVE FLSTKLALLS PVLHDLGYLS GQPEVGEEPF LPLILVVFFR RLYIIHYNLI PDDTRIDQSG SG
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.