Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P09170_001 | Banana | nucleus | 40.24 | 54.55 |
| GSMUA_Achr10P... | Banana | nucleus | 58.54 | 52.17 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 38.41 | 34.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.29 | 29.34 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 39.63 | 28.76 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 65.24 | 27.65 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 40.85 | 25.97 |
| Os05t0103000-01 | Rice | nucleus | 53.66 | 25.96 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 43.29 | 25.82 |
| GSMUA_Achr10P... | Banana | nucleus | 43.29 | 25.63 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 43.29 | 25.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.07 | 24.38 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 44.51 | 23.1 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 41.46 | 22.22 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 41.46 | 21.79 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 41.46 | 21.45 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 45.12 | 20.44 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 42.68 | 20.17 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 40.24 | 19.64 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 33.54 | 18.97 |
| GSMUA_Achr10P... | Banana | nucleus | 45.73 | 18.66 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 43.29 | 18.64 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 35.98 | 18.5 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 40.24 | 18.08 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 40.24 | 17.98 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 44.51 | 17.63 |
| GSMUA_Achr10P... | Banana | nucleus | 44.51 | 17.26 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 38.41 | 17.21 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 40.24 | 17.05 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 43.29 | 16.82 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 43.9 | 16.78 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 45.12 | 16.74 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 44.51 | 15.84 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 42.07 | 15.83 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 43.29 | 15.54 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 47.56 | 15.51 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 45.73 | 15.37 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 44.51 | 15.27 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 47.56 | 14.94 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 48.78 | 14.04 |
| GSMUA_Achr10P... | Banana | mitochondrion | 45.12 | 11.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P16480_001 | EnsemblPlants:GSMUA_Achr6T16480_001 | EnsemblPlantsGene:GSMUA_Achr6G16480_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002948B2A | UniProt:M0T7J6 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Transcription factor bHLH137 [Source:GMGC_GENE;Acc:GSMUA_Achr6G16480_001]
Coordinates
chr6:-:10989119..10992104
Molecular Weight (calculated)
18931.7 Da
IEP (calculated)
8.586
GRAVY (calculated)
-0.680
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSNKKLVEF KHIYFDPNYE GKICKQRRLR ETDDKKPKAD DTKASKTCGE SPAGYIHVRA RRGEATDSHS LAERVRREKI SERMKVLQSL VPGCEKVTGK
101: ALMLDEIINY VQSLQNQVEF LSMKLASLNP MLYFDADSDE YMSQPESVTS FCNYLARFEL PKSM
101: ALMLDEIINY VQSLQNQVEF LSMKLASLNP MLYFDADSDE YMSQPESVTS FCNYLARFEL PKSM
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.