Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P16120_001 | Banana | nucleus | 59.84 | 63.9 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 13.93 | 56.2 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 15.37 | 45.73 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 21.11 | 39.92 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 14.55 | 38.59 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 17.42 | 37.61 |
| GSMUA_Achr10P... | Banana | nucleus | 14.14 | 37.5 |
| GSMUA_Achr10P... | Banana | nucleus | 31.76 | 36.64 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 20.08 | 35.64 |
| Os04t0350700-01 | Rice | nucleus | 18.44 | 34.22 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 30.12 | 33.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.26 | 33.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.98 | 32.23 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 22.13 | 32.14 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 20.29 | 31.33 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 19.26 | 29.65 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 21.72 | 29.28 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 16.8 | 29.08 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 21.31 | 28.34 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 23.57 | 27.25 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 17.42 | 27.24 |
| Zm00001d006065_P002 | Maize | nucleus | 19.47 | 27.14 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 17.01 | 27.12 |
| GSMUA_Achr10P... | Banana | nucleus | 15.37 | 27.08 |
| OQU89735 | Sorghum | nucleus | 19.47 | 26.99 |
| Zm00001d021019_P001 | Maize | nucleus | 19.47 | 26.84 |
| Os09t0501600-01 | Rice | nucleus | 20.08 | 26.78 |
| TraesCS3A01G421400.1 | Wheat | nucleus | 23.98 | 26.77 |
| Os11t0442500-00 | Rice | nucleus | 20.49 | 26.67 |
| TraesCS7D01G257000.2 | Wheat | nucleus | 20.9 | 26.36 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 22.34 | 26.33 |
| TraesCS7B01G152800.1 | Wheat | nucleus | 20.7 | 26.23 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 18.44 | 25.94 |
| Zm00001d031561_P002 | Maize | nucleus | 20.7 | 25.83 |
| EES15330 | Sorghum | nucleus | 20.7 | 25.44 |
| HORVU7Hr1G052870.23 | Barley | nucleus | 20.29 | 25.19 |
| GSMUA_Achr10P... | Banana | nucleus | 20.7 | 25.12 |
| Os08t0524800-01 | Rice | nucleus | 20.7 | 24.94 |
| TraesCS7A01G256200.3 | Wheat | nucleus | 20.29 | 24.94 |
| TraesCS3B01G457400.1 | Wheat | nucleus | 24.18 | 24.89 |
| Zm00001d042373_P002 | Maize | nucleus | 23.57 | 24.84 |
| TraesCS5B01G278600.1 | Wheat | nucleus | 18.85 | 24.66 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 18.44 | 24.66 |
| OQU83382 | Sorghum | nucleus | 21.72 | 24.65 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 24.18 | 24.63 |
| TraesCS2A01G275600.1 | Wheat | nucleus | 20.49 | 24.63 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 18.85 | 24.53 |
| Os01t0915600-01 | Rice | nucleus | 24.18 | 24.53 |
| TraesCS2D01G274600.1 | Wheat | nucleus | 20.49 | 24.39 |
| TraesCS5A01G279200.2 | Wheat | nucleus | 19.26 | 24.35 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 15.78 | 24.14 |
| EES04098 | Sorghum | nucleus | 23.77 | 23.97 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 18.65 | 23.88 |
| TraesCS2B01G293300.1 | Wheat | nucleus | 20.29 | 23.63 |
| Solyc09g057710.2.1 | Tomato | nucleus | 22.75 | 23.42 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 25.0 | 23.37 |
| Zm00001d012067_P003 | Maize | nucleus | 22.95 | 23.33 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 22.75 | 23.22 |
| Zm00001d049158_P001 | Maize | nucleus | 20.9 | 22.97 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 17.01 | 22.68 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 20.08 | 22.48 |
| PGSC0003DMT400053639 | Potato | nucleus | 22.54 | 22.36 |
| Zm00001d007311_P001 | Maize | nucleus | 21.11 | 22.34 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 19.47 | 22.3 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 22.95 | 22.27 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 17.42 | 21.96 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 12.91 | 21.72 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 24.8 | 21.23 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 18.65 | 21.21 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 19.26 | 20.39 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 15.37 | 19.38 |
| HORVU3Hr1G093310.2 | Barley | nucleus, plasma membrane, plastid | 25.2 | 19.34 |
| GSMUA_Achr10P... | Banana | mitochondrion | 24.59 | 18.24 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P02770_001 | EnsemblPlants:GSMUA_Achr7T02770_001 | EnsemblPlantsGene:GSMUA_Achr7G02770_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000294D7FA | UniProt:M0TE67 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
BHLH transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G02770_001]
Coordinates
chr7:+:2233939..2236322
Molecular Weight (calculated)
53294.5 Da
IEP (calculated)
6.566
GRAVY (calculated)
-0.581
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSGSSDRSP KCFLNQNWDR SVDHISQFGS ALGSFMSPQS SFELERGLQR IGHLSEEVPP QSHFMDSSGN SQALGGLVIA GNLALAHLDQ FPADPGFAER
101: AARFSSFDGQ SYGWFSGHFE LPGSGKPSTA AIIQSLTASG LQIGHLESNR QIPVSNGLQL KMNSAGPAIS REEMSLSDPI SASNGKKRKA PSKSKEKDAA
201: SPKPSTDPPK VADEEDSDTK RCRSSGKIHE IGIDNVKPKL EQNDGARSNG NAEQKQRKAG NDKPSEPPKD YIHVRARRGQ ATDSHSLAER VRREKISQRM
301: KLLQDLVPGC SKVTGKAVML DEIINYVQSL QRQVEFLSMK LATVNPQLDF DNLANLRAKD MIQIGGPVPN SAYSPEMSMV SSYADVPQQK DILHSIATNG
401: MDFHCSMNLL DSTGHQDLNA HQACLGGFGD SSSQLGFFWE DDLQNIVQMG IGQDQEIVAS SHNFHGGWKS RFNNCILILP FIQLDDSW
101: AARFSSFDGQ SYGWFSGHFE LPGSGKPSTA AIIQSLTASG LQIGHLESNR QIPVSNGLQL KMNSAGPAIS REEMSLSDPI SASNGKKRKA PSKSKEKDAA
201: SPKPSTDPPK VADEEDSDTK RCRSSGKIHE IGIDNVKPKL EQNDGARSNG NAEQKQRKAG NDKPSEPPKD YIHVRARRGQ ATDSHSLAER VRREKISQRM
301: KLLQDLVPGC SKVTGKAVML DEIINYVQSL QRQVEFLSMK LATVNPQLDF DNLANLRAKD MIQIGGPVPN SAYSPEMSMV SSYADVPQQK DILHSIATNG
401: MDFHCSMNLL DSTGHQDLNA HQACLGGFGD SSSQLGFFWE DDLQNIVQMG IGQDQEIVAS SHNFHGGWKS RFNNCILILP FIQLDDSW
001: MDNELFMNTE FPPPPEMATH FEHQQSSSSA MMLNWALMDP NPHQDSSFLW EKSTEQQQQQ SIFDSALSSL VSSPTPSNSN FSGGGGDGFL IRELIGKLGN
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQYQMF SEEDLQSIVG MGVAENPNNE SQHMKIEL
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQYQMF SEEDLQSIVG MGVAENPNNE SQHMKIEL
Arabidopsis Description
BHLH78Transcription factor bHLH78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.