Factsheet for HORVU7Hr1G052870.23

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G256200.3	Wheat	nucleus	91.6	90.68
TraesCS7D01G257000.2	Wheat	nucleus	84.73	86.05
TraesCS7B01G152800.1	Wheat	nucleus	83.97	85.71
EES15330	Sorghum	nucleus	70.74	70.03
Os08t0524800-01	Rice	nucleus	72.01	69.88
Zm00001d031561_P002	Maize	nucleus	66.41	66.75
HORVU5Hr1G075430.5	Barley	nucleus, plastid	47.58	43.9
HORVU5Hr1G107520.2	Barley	cytosol, nucleus	19.85	37.68
HORVU5Hr1G077390.1	Barley	nucleus	22.65	31.9
HORVU7Hr1G055180.4	Barley	nucleus, plastid	23.66	31.63
HORVU7Hr1G094690.1	Barley	plastid	18.58	29.55
HORVU4Hr1G009970.28	Barley	nucleus	23.66	28.79
Solyc09g057710.2.1	Tomato	nucleus	31.81	26.37
HORVU6Hr1G068980.2	Barley	nucleus	24.94	25.39
PGSC0003DMT400053639	Potato	nucleus	31.55	25.2
GSMUA_Achr10P...	Banana	nucleus	25.45	23.64
HORVU0Hr1G020200.1	Barley	nucleus	25.7	22.95
GSMUA_Achr7P22770_001	Banana	nucleus	24.94	22.17
GSMUA_Achr4P16120_001	Banana	nucleus	24.17	20.79
GSMUA_Achr7P02770_001	Banana	nucleus	25.19	20.29
HORVU3Hr1G093310.2	Barley	nucleus, plasma membrane, plastid	32.06	19.81

Protein Annotations

EnsemblPlants:HORVU7Hr1G052870.23	EnsemblPlantsGene:HORVU7Hr1G052870	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF169	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000B47C150	UniProt:A0A287WII9	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:

Description

No Description!

Coordinates

chrchr7H:-:204186890..204188928

Molecular Weight (calculated)

41857.6 Da

IEP (calculated)

7.436

GRAVY (calculated)

-0.374

Length

393 amino acids

Sequence
(BLAST)

001: MEGRAGGGSG DYISSLLTSS PMLDFGMLDG AVTAGGDCLD KFCGDPGFAE RAARLSSFNG QHLAPGLLGM LPPAPGXEFG GSREASSVSD PASAMKDANA
101: KKRKAPASKG KAKEPSLSTS CQVGEHKEPD AKRCRTGDAE KKAAAPVRPK AEQAGSDSSV EDGEQRKGKG KNAKPVEPPK DYVHVRARRG QATDSHSLAE
201: RVRRERISQR MKFLQDLVPG CNKVIGKALM LDEIINYVQS LQRQVEFLSM KLATVNPLDF SNLPTLLHKD MYGPSASSVF SLESSSSAFP FSDQGDVFQS
301: FLPNSMESQC TLNQLDLALS QATNAAQYGF QDATASTNLQ QVILALRILW VLASLDAGLI LIHFGFVARL SAEELLGGRS PERFSCGQQT EPG

Best Arabidopsis Sequence Match ( AT5G48560.2 )
(BLAST)

001: MDNELFMNTE FPPPPEMATH FEHQQSSSSA MMLNWALMDP NPHQDSSFLW EKSTEQQQQQ SIFDSALSSL VSSPTPSNSN FSGGGGDGFL IRELIGKLGN
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQV

Arabidopsis Description

BHLH78Transcription factor bHLH78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.