Factsheet for HORVU7Hr1G055180.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G264600.3	Wheat	nucleus	95.24	83.58
TraesCS7B01G161700.3	Wheat	nucleus, plastid	95.24	83.58
TraesCS7A01G263700.1	Wheat	nucleus	85.03	80.65
EES14175	Sorghum	nucleus	73.13	73.38
Os08t0536800-01	Rice	cytosol, nucleus, plastid	70.41	66.99
Zm00001d031665_P001	Maize	mitochondrion	70.41	65.71
Zm00001d049870_P001	Maize	nucleus	67.69	62.38
HORVU5Hr1G077390.1	Barley	nucleus	56.46	59.5
VIT_17s0000g00430.t01	Wine grape	nucleus	45.58	38.4
PGSC0003DMT400069568	Potato	nucleus	35.71	36.97
Solyc06g072520.1.1	Tomato	nucleus, plastid	35.71	36.33
Solyc03g097820.1.1	Tomato	nucleus	40.48	36.06
PGSC0003DMT400051137	Potato	nucleus	40.82	35.5
KRH41084	Soybean	nucleus	40.82	35.4
AT5G50915.2	Thale cress	nucleus	34.01	34.97
KRH59766	Soybean	nucleus	40.48	34.8
KRH63842	Soybean	nucleus	40.82	34.68
CDY45806	Canola	nucleus	34.35	34.47
Bra022753.1-P	Field mustard	nucleus	34.69	34.34
KRH54121	Soybean	nucleus	40.48	34.1
CDX84885	Canola	nucleus	34.35	34.01
HORVU5Hr1G107520.2	Barley	cytosol, nucleus	22.79	32.37
VIT_01s0244g00010.t01	Wine grape	nucleus	29.25	31.85
GSMUA_Achr2P21460_001	Banana	nucleus	35.03	26.61
HORVU4Hr1G009970.28	Barley	nucleus	28.91	26.32
HORVU7Hr1G094690.1	Barley	plastid	22.11	26.32
HORVU6Hr1G068980.2	Barley	nucleus	31.97	24.35
HORVU7Hr1G052870.23	Barley	nucleus	31.63	23.66
HORVU5Hr1G075430.5	Barley	nucleus, plastid	30.27	20.89
HORVU0Hr1G020200.1	Barley	nucleus	27.89	18.64
HORVU3Hr1G093310.2	Barley	nucleus, plasma membrane, plastid	31.97	14.78

Protein Annotations

EnsemblPlants:HORVU7Hr1G055180.4	EnsemblPlantsGene:HORVU7Hr1G055180	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF302	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000B46C8D9	UniProt:A0A287WK46	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:

Description

No Description!

Coordinates

chrchr7H:+:225250306..225252705

Molecular Weight (calculated)

32229.7 Da

IEP (calculated)

6.601

GRAVY (calculated)

-0.532

Length

294 amino acids

Sequence
(BLAST)

001: MADFSSVHHH SLLKMPAVFT TNDTTTPNIS SFLFYNQASH GQSPAPANAC AAMVKDASWE SSSAVLDNAD SPSVDRKRKA TDDSITLSSA HSKDCKDGKS
101: RRKREKSSTE QDQEEAPKGY IHVRARRGQA TDSHSLAERV RRERISERMR LLQTLVPGCD KVVTGKALVL DEIINYVQSL QNQVEFLSMR IASMSPVLYG
201: FGLDSDGLHD QTQKIGGMFQ QEALAVPAPA LNQASPAASQ DMMDTTSYSL QGQGGISFSQ SQSQDSGSYL MQSVGEQRHE LLNQLVFSNM CSFQ

Best Arabidopsis Sequence Match ( AT5G50915.1 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.