Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 98.07 | 80.56 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 98.07 | 79.92 |
| Solyc03g113560.2.1 | Tomato | cytosol | 33.33 | 67.65 |
| Os03t0802900-01 | Rice | nucleus | 83.57 | 65.28 |
| EER90712 | Sorghum | nucleus | 75.36 | 61.66 |
| Zm00001d034503_P002 | Maize | nucleus | 75.85 | 61.57 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 64.25 | 51.55 |
| PGSC0003DMT400004855 | Potato | nucleus | 54.11 | 50.68 |
| Solyc04g005130.2.1 | Tomato | nucleus | 55.56 | 50.66 |
| KRH56987 | Soybean | plastid | 51.69 | 47.77 |
| KRH03393 | Soybean | nucleus | 50.24 | 45.41 |
| KRH63442 | Soybean | nucleus | 52.66 | 44.86 |
| KRH69415 | Soybean | nucleus | 56.04 | 44.62 |
| KRH69414 | Soybean | nucleus | 54.59 | 44.31 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 58.45 | 43.68 |
| KRH45811 | Soybean | nucleus | 57.49 | 43.59 |
| KRH74729 | Soybean | nucleus | 55.07 | 43.18 |
| KRH54478 | Soybean | nucleus | 55.07 | 42.38 |
| PGSC0003DMT400062844 | Potato | nucleus | 58.94 | 41.92 |
| PGSC0003DMT400058204 | Potato | nucleus | 53.62 | 41.11 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 56.04 | 40.85 |
| CDX93427 | Canola | nucleus | 52.66 | 40.67 |
| Bra019935.1-P | Field mustard | nucleus | 52.66 | 40.67 |
| CDY37979 | Canola | nucleus | 52.17 | 40.6 |
| Solyc05g006650.2.1 | Tomato | nucleus | 52.66 | 40.07 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 64.25 | 39.58 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 63.77 | 35.97 |
| AT5G62610.2 | Thale cress | nucleus | 48.31 | 35.59 |
| CDX87255 | Canola | nucleus, plastid | 47.83 | 35.36 |
| CDY61420 | Canola | extracellular | 23.19 | 35.29 |
| AT1G59640.2 | Thale cress | nucleus | 48.79 | 29.45 |
| HORVU7Hr1G094690.1 | Barley | plastid | 30.43 | 25.51 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 30.92 | 22.94 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 32.37 | 22.79 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 34.3 | 21.98 |
| HORVU7Hr1G052870.23 | Barley | nucleus | 37.68 | 19.85 |
| HORVU6Hr1G068980.2 | Barley | nucleus | 34.78 | 18.65 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 38.16 | 17.95 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 35.75 | 17.37 |
| HORVU3Hr1G093310.2 | Barley | nucleus, plasma membrane, plastid | 40.1 | 13.05 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G107520.2 | EnsemblPlantsGene:HORVU5Hr1G107520 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF305 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000B47FF75 | UniProt:A0A287SNB2 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
No Description!
Coordinates
chrchr5H:+:627195848..627199487
Molecular Weight (calculated)
22660.2 Da
IEP (calculated)
6.521
GRAVY (calculated)
-0.830
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: REPPASEDDS ASARPVSTSG GSGGQDLTDA EAKRFKANKS SDDNGSFRKD AEADSRNASK AVDQNPPPPK QDFIHVRARR GQATDSHSLA ERARREKITE
101: RMKILQDLVP GCNKVIGKAS VLDEIINYVQ ALERQIEFLS MKLEAVNAHA HAHNGVETFP TKDFAAPTYN TAPGLTFDPQ TPREYAQGSP ASEWLHMQIG
201: GTYERVT
101: RMKILQDLVP GCNKVIGKAS VLDEIINYVQ ALERQIEFLS MKLEAVNAHA HAHNGVETFP TKDFAAPTYN TAPGLTFDPQ TPREYAQGSP ASEWLHMQIG
201: GTYERVT
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.