Factsheet for Bra019935.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93427	Canola	nucleus	99.25	99.25
KRH69414	Soybean	nucleus	54.85	57.65
KRH74729	Soybean	nucleus	56.34	57.2
VIT_01s0026g01140.t01	Wine grape	nucleus	58.96	57.04
HORVU5Hr1G107520.2	Barley	cytosol, nucleus	40.67	52.66
Os07t0193800-01	Rice	endoplasmic reticulum	40.3	51.92
Os03t0802900-01	Rice	nucleus	49.25	49.81
Zm00001d034503_P002	Maize	nucleus	47.39	49.8
AT1G59640.2	Thale cress	nucleus	63.43	49.56
EER90712	Sorghum	nucleus	45.52	48.22
TraesCS5D01G459800.1	Wheat	nucleus, plastid	45.15	48.02
TraesCS5B01G457600.1	Wheat	nucleus, plastid	44.4	46.85
Zm00001d007768_P001	Maize	nucleus	43.66	46.61
GSMUA_Achr9P11020_001	Banana	nucleus	44.78	46.51
GSMUA_Achr7P01750_001	Banana	nucleus	47.39	37.8
GSMUA_Achr4P17570_001	Banana	golgi, vacuole	48.88	35.69
Bra037059.1-P	Field mustard	nucleus	30.6	28.67
Bra034636.1-P	Field mustard	nucleus	29.48	28.11
Bra014972.1-P	Field mustard	nucleus	34.33	27.96
Bra022753.1-P	Field mustard	nucleus	30.97	27.95
Bra028335.1-P	Field mustard	nucleus	33.96	27.41
Bra031700.1-P	Field mustard	nucleus	33.21	27.22
Bra018461.1-P	Field mustard	nucleus	32.09	26.71
Bra019962.1-P	Field mustard	nucleus	32.46	25.66
Bra011540.1-P	Field mustard	nucleus	31.34	25.61
Bra003300.1-P	Field mustard	nucleus	29.48	24.53
Bra038336.1-P	Field mustard	plastid	32.84	24.11
Bra004679.1-P	Field mustard	nucleus	26.87	23.84
Bra014603.1-P	Field mustard	nucleus	30.22	23.41
Bra007358.1-P	Field mustard	nucleus	29.48	22.07
Bra020691.1-P	Field mustard	nucleus	36.19	21.8
Bra029640.1-P	Field mustard	nucleus, plastid	35.82	21.62
Bra037478.1-P	Field mustard	nucleus	37.69	20.61
Bra004348.1-P	Field mustard	nucleus	34.7	19.54

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra019935	EnsemblPlants:Bra019935.1	EnsemblPlants:Bra019935.1-P
ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007275
GO:GO:0008150	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0046983	GO:GO:0048446
InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	UniProt:M4DTU2	PFAM:PF00010	PFscan:PS50888
PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000253EA16	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

AT1G59640 (E=4e-089) ZCW32, BPE, BPEUB | ZCW32; DNA binding / transcription factor

Coordinates

chrA06:+:3618115..3619659

Molecular Weight (calculated)

29307.4 Da

IEP (calculated)

5.975

GRAVY (calculated)

-0.649

Length

268 amino acids

Sequence
(BLAST)

001: MDPGGMMNEA GAYNLAEIWP YPTINGGAAV NTSMRSGVSF GGPNLVHQFA DSNLISNTNC NDPARMSHAL SQAVVAGIAG ARKRREAGAE DNNVVSGSDG
101: HDANDGDSKK QKTTGCEDEV EVGTLDQKKQ QLPEPPKDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR
201: QVEFLSMKLE AVNSRMTPGI EVFPPKEFDQ QTFENQGMQF GAQGTREYSR GASPEWLHMQ VGGGFERS

Best Arabidopsis Sequence Match ( AT1G59640.1 )
(BLAST)

001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS

Arabidopsis Description

BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.