Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 80.56 | 98.07 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 98.41 | 97.64 |
| Os03t0802900-01 | Rice | nucleus | 78.97 | 75.09 |
| EER90712 | Sorghum | nucleus | 71.83 | 71.54 |
| Zm00001d034503_P002 | Maize | nucleus | 71.83 | 70.98 |
| Solyc03g113560.2.1 | Tomato | cytosol | 26.98 | 66.67 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 59.92 | 58.53 |
| Solyc04g005130.2.1 | Tomato | nucleus | 48.41 | 53.74 |
| PGSC0003DMT400004855 | Potato | nucleus | 46.43 | 52.94 |
| KRH56987 | Soybean | plastid | 44.84 | 50.45 |
| KRH63442 | Soybean | nucleus | 47.22 | 48.97 |
| KRH45811 | Soybean | nucleus | 52.38 | 48.35 |
| KRH69414 | Soybean | nucleus | 48.81 | 48.24 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 52.78 | 48.01 |
| KRH69415 | Soybean | nucleus | 49.21 | 47.69 |
| KRH03393 | Soybean | nucleus | 43.25 | 47.6 |
| KRH74729 | Soybean | nucleus | 49.21 | 46.97 |
| PGSC0003DMT400062844 | Potato | nucleus | 53.97 | 46.74 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 52.38 | 46.48 |
| KRH54478 | Soybean | nucleus | 49.6 | 46.47 |
| Bra019935.1-P | Field mustard | nucleus | 48.02 | 45.15 |
| CDX93427 | Canola | nucleus | 48.02 | 45.15 |
| CDY37979 | Canola | nucleus | 47.62 | 45.11 |
| PGSC0003DMT400058204 | Potato | nucleus | 48.02 | 44.81 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 59.52 | 44.64 |
| Solyc05g006650.2.1 | Tomato | nucleus | 47.22 | 43.75 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 62.3 | 42.78 |
| AT5G62610.2 | Thale cress | nucleus | 45.24 | 40.57 |
| CDX87255 | Canola | nucleus, plastid | 44.05 | 39.64 |
| CDY61420 | Canola | extracellular | 19.05 | 35.29 |
| AT1G59640.2 | Thale cress | nucleus | 42.86 | 31.49 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 29.76 | 23.73 |
| TraesCS5D01G300100.1 | Wheat | nucleus | 25.4 | 23.19 |
| TraesCS6D01G253000.1 | Wheat | nucleus | 30.95 | 22.03 |
| TraesCS7D01G257000.2 | Wheat | nucleus | 33.73 | 21.96 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 28.17 | 21.19 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 31.35 | 21.07 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 26.19 | 20.89 |
| TraesCS2D01G274600.1 | Wheat | nucleus | 32.14 | 19.76 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 33.73 | 19.32 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 31.35 | 18.63 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 35.32 | 18.58 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G459800.1 | EnsemblPlantsGene:TraesCS5D01G459800 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF305 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
No Description!
Coordinates
chr5D:-:503663901..503667241
Molecular Weight (calculated)
27318.6 Da
IEP (calculated)
9.021
GRAVY (calculated)
-0.871
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAPQLKAE PWRPPHRAGA AGGRAAGEAS SAVTGQSSGS RPRRRQREPP ASEDDSASAR PVSTSGGGGQ DLTDAEAKRF KANKSSDENG SFRKDAEADS
101: RNASKAVDQN PPPPKQDFIH VRARRGQATD SHSLAERARR EKITERMKIL QDLVPGCNKV IGKASVLDEI INYVQALERQ IEFLSMKLEA VNAHAHAHNG
201: VETFPTKDFA APTYNTAPGL TFDPQTPREY AQGSPAAEWL HMQIGGTYER VT
101: RNASKAVDQN PPPPKQDFIH VRARRGQATD SHSLAERARR EKITERMKIL QDLVPGCNKV IGKASVLDEI INYVQALERQ IEFLSMKLEA VNAHAHAHNG
201: VETFPTKDFA APTYNTAPGL TFDPQTPREY AQGSPAAEWL HMQIGGTYER VT
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.