Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93427 | Canola | nucleus | 98.5 | 97.76 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 60.9 | 58.48 |
| KRH74729 | Soybean | nucleus | 57.89 | 58.33 |
| KRH69414 | Soybean | nucleus | 55.64 | 58.04 |
| CDY61420 | Canola | extracellular | 27.44 | 53.68 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 40.98 | 52.4 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 40.6 | 52.17 |
| AT1G59640.2 | Thale cress | nucleus | 64.29 | 49.85 |
| Os03t0802900-01 | Rice | nucleus | 49.62 | 49.81 |
| Zm00001d034503_P002 | Maize | nucleus | 47.74 | 49.8 |
| EER90712 | Sorghum | nucleus | 45.86 | 48.22 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 46.24 | 47.67 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 45.11 | 47.62 |
| Zm00001d007768_P001 | Maize | nucleus | 44.74 | 47.41 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 44.36 | 46.46 |
| CDX87255 | Canola | nucleus, plastid | 47.74 | 45.36 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 48.5 | 38.39 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 50.38 | 36.51 |
| CDY25986 | Canola | plastid | 27.82 | 33.95 |
| CDY18099 | Canola | nucleus | 27.07 | 32.29 |
| CDY05670 | Canola | nucleus | 31.2 | 32.17 |
| CDX76288 | Canola | nucleus | 28.95 | 30.8 |
| CDY72360 | Canola | cytosol | 17.29 | 30.67 |
| CDX86296 | Canola | nucleus | 31.2 | 30.63 |
| CDY33821 | Canola | mitochondrion, plastid | 22.56 | 30.61 |
| CDX77488 | Canola | nucleus | 35.34 | 28.57 |
| CDY17466 | Canola | nucleus | 29.7 | 28.42 |
| CDX85122 | Canola | nucleus | 35.34 | 28.4 |
| CDY45806 | Canola | nucleus | 31.2 | 28.33 |
| CDX84885 | Canola | nucleus | 31.2 | 27.95 |
| CDY08308 | Canola | nucleus | 30.45 | 27.74 |
| CDY31048 | Canola | nucleus | 32.71 | 27.71 |
| CDX98249 | Canola | nucleus | 28.57 | 27.14 |
| CDY56230 | Canola | nucleus | 33.83 | 27.03 |
| CDY64034 | Canola | nucleus | 30.83 | 26.71 |
| CDY20659 | Canola | nucleus | 32.71 | 26.13 |
| CDX75440 | Canola | nucleus | 31.58 | 25.53 |
| CDY63738 | Canola | nucleus | 32.71 | 25.44 |
| CDY53834 | Canola | nucleus | 32.71 | 25.07 |
| CDY22605 | Canola | nucleus | 33.08 | 24.93 |
| CDX67710 | Canola | nucleus | 30.08 | 24.84 |
| CDX69067 | Canola | nucleus | 31.58 | 24.71 |
| CDY61581 | Canola | plastid | 16.54 | 24.04 |
| CDX88966 | Canola | nucleus | 29.7 | 23.8 |
| CDX79883 | Canola | nucleus | 26.69 | 23.51 |
| CDY53497 | Canola | nucleus | 26.69 | 22.98 |
| CDY51061 | Canola | nucleus | 36.47 | 22.4 |
| CDY06074 | Canola | nucleus | 29.32 | 21.91 |
| CDY57925 | Canola | nucleus | 32.71 | 21.86 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 11.28 | 21.74 |
| CDX71994 | Canola | nucleus | 29.32 | 21.61 |
| CDY35923 | Canola | nucleus, plastid | 36.09 | 21.43 |
| CDY47665 | Canola | cytosol | 20.68 | 21.4 |
| CDY28061 | Canola | nucleus | 36.09 | 21.19 |
| CDX86297 | Canola | nucleus | 37.59 | 20.41 |
| CDY45835 | Canola | nucleus | 34.59 | 20.31 |
| CDX85347 | Canola | nucleus | 37.22 | 20.16 |
| CDX81575 | Canola | nucleus | 34.96 | 19.58 |
| CDX95974 | Canola | nucleus | 34.96 | 19.42 |
| CDY33568 | Canola | nucleus | 34.59 | 19.09 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078HKX2 | UniProt:A0A078HKX2 | EnsemblPlants:CDY37979 |
| ProteinID:CDY37979 | ProteinID:CDY37979.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00065023001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE3AA0 |
| InterPro:bHLH_dom | : | : | : | : | : |
Description
BnaC05g07950DBnaC05g07950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKX2]
Coordinates
chrLK032413:-:265489..267343
Molecular Weight (calculated)
29211.3 Da
IEP (calculated)
6.257
GRAVY (calculated)
-0.680
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPGGMMNEA GAYNLAEIWP YPINGGATVN TSMRSGVSFG GPNLVHQFSD SNLISNTNCN DPARMSHALS QAVVAGIAGA RKRRDAAEDN KVVSGSDGHD
101: ANDGDSKKQK TTGCEDEVET GTLDQKKQQL PEPPKDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI GKALVLDEII NYIQSLQRQV
201: EFLSMKLEAV NSRMTPGIEV FPPKEFDQQT FENQGMQFGA QATREYSRGA SPEWLHMQVG GGFERS
101: ANDGDSKKQK TTGCEDEVET GTLDQKKQQL PEPPKDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI GKALVLDEII NYIQSLQRQV
201: EFLSMKLEAV NSRMTPGIEV FPPKEFDQQT FENQGMQFGA QATREYSRGA SPEWLHMQVG GGFERS
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.