Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95974 | Canola | nucleus | 93.98 | 94.57 |
| Bra004348.1-P | Field mustard | nucleus | 92.53 | 93.7 |
| CDX81575 | Canola | nucleus | 79.67 | 80.84 |
| CDY45835 | Canola | nucleus | 74.07 | 78.81 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 44.19 | 45.42 |
| CDY72360 | Canola | cytosol | 13.9 | 44.67 |
| Solyc05g010610.2.1 | Tomato | nucleus | 44.81 | 41.78 |
| PGSC0003DMT400050585 | Potato | nucleus | 45.02 | 41.73 |
| KRH71031 | Soybean | nucleus | 47.51 | 41.56 |
| KRH75189 | Soybean | nucleus | 47.3 | 41.45 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 23.44 | 41.09 |
| PGSC0003DMT400022704 | Potato | nucleus | 44.19 | 39.81 |
| PGSC0003DMT400004830 | Potato | nucleus | 38.17 | 39.74 |
| Solyc01g010130.2.1 | Tomato | nucleus | 43.36 | 38.92 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 34.02 | 38.68 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 34.02 | 38.68 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 34.02 | 38.59 |
| Os09t0474100-01 | Rice | nucleus | 34.23 | 38.55 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 32.57 | 37.92 |
| KXG35834 | Sorghum | nucleus | 34.23 | 37.76 |
| Zm00001d020826_P001 | Maize | nucleus | 33.82 | 37.56 |
| CDY25986 | Canola | plastid | 16.8 | 37.16 |
| Solyc04g005220.1.1 | Tomato | nucleus | 31.74 | 36.52 |
| CDY31048 | Canola | nucleus | 23.65 | 36.31 |
| CDY08308 | Canola | nucleus | 21.78 | 35.96 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 32.16 | 35.47 |
| CDY18099 | Canola | nucleus | 16.39 | 35.43 |
| Zm00001d005964_P002 | Maize | nucleus | 32.99 | 35.1 |
| CDY64034 | Canola | nucleus | 22.2 | 34.85 |
| CDX93427 | Canola | nucleus | 19.29 | 34.7 |
| CDY37979 | Canola | nucleus | 19.09 | 34.59 |
| CDY20659 | Canola | nucleus | 23.86 | 34.53 |
| CDY05670 | Canola | nucleus | 18.46 | 34.5 |
| CDY33821 | Canola | mitochondrion, plastid | 13.69 | 33.67 |
| CDY56230 | Canola | nucleus | 23.24 | 33.63 |
| CDX98249 | Canola | nucleus | 19.5 | 33.57 |
| CDY22605 | Canola | nucleus | 24.48 | 33.43 |
| CDX86296 | Canola | nucleus | 18.67 | 33.21 |
| CDX76288 | Canola | nucleus | 17.22 | 33.2 |
| CDY63738 | Canola | nucleus | 23.44 | 33.04 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 21.37 | 33.01 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 20.95 | 33.01 |
| CDY53834 | Canola | nucleus | 23.65 | 32.85 |
| CDX77488 | Canola | nucleus | 22.2 | 32.52 |
| CDX85122 | Canola | nucleus | 22.2 | 32.33 |
| CDY45806 | Canola | nucleus | 19.5 | 32.08 |
| CDX67710 | Canola | nucleus | 21.37 | 31.99 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 9.13 | 31.88 |
| CDX84885 | Canola | nucleus | 19.5 | 31.65 |
| CDX75440 | Canola | nucleus | 21.37 | 31.31 |
| CDY61581 | Canola | plastid | 11.83 | 31.15 |
| CDX79883 | Canola | nucleus | 19.5 | 31.13 |
| CDY17466 | Canola | nucleus | 17.84 | 30.94 |
| CDY53497 | Canola | nucleus | 19.71 | 30.74 |
| CDX88966 | Canola | nucleus | 20.95 | 30.42 |
| CDX69067 | Canola | nucleus | 21.16 | 30.0 |
| CDX87255 | Canola | nucleus, plastid | 17.22 | 29.64 |
| OQU81018 | Sorghum | nucleus | 22.82 | 29.33 |
| CDX71994 | Canola | nucleus | 21.78 | 29.09 |
| CDY06074 | Canola | nucleus | 21.37 | 28.93 |
| CDY57925 | Canola | nucleus | 23.44 | 28.39 |
| CDY51061 | Canola | nucleus | 25.1 | 27.94 |
| CDY61420 | Canola | extracellular | 7.88 | 27.94 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 26.14 | 27.33 |
| CDY35923 | Canola | nucleus, plastid | 24.9 | 26.79 |
| CDY28061 | Canola | nucleus | 24.9 | 26.49 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 24.07 | 26.36 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 23.86 | 26.14 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 23.86 | 26.14 |
| CDX86297 | Canola | nucleus | 26.56 | 26.12 |
| CDX85347 | Canola | nucleus | 26.56 | 26.07 |
| TraesCS7B01G118800.1 | Wheat | nucleus | 23.44 | 25.68 |
| CDY47665 | Canola | cytosol | 13.28 | 24.9 |
| Os08t0487700-00 | Rice | nucleus | 17.01 | 23.91 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078H9S2 | UniProt:A0A078H9S2 | EnsemblPlants:CDY33568 |
| ProteinID:CDY33568 | ProteinID:CDY33568.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00054859001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF0A56 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g29840DBnaC06g29840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9S2]
Coordinates
chrLK032317:-:193839..196470
Molecular Weight (calculated)
51857.0 Da
IEP (calculated)
5.082
GRAVY (calculated)
-0.806
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSEKDELR NGDDTTVNYD ESANIPPPDW RVSGSNPVSD SYPTENLISS SQMMETLWYD PANVQAVGYG GFNGGGNPSS SSSFRGNIDR SLEMGWSLPN
101: LLPPKGGNGM FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGSFSDM MNQQQPLGNP ESVGLFLQGQ CPSSEVNVVG VAHNDASSAM KETNKQNVPG
201: SGNVSEDTQS SGGNGQKGGE TSSKGFDSKK RKRNKQNAGA DQSNRSQQSE EEPDNNNGGG AEKRNDEQSP NSQGNKTNSG KQQGKQASDP KDGYIHVRAR
301: RGQATNSHSL AERVRREKIS ERMKFLQDLV PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPQ MDFNREGLLA KDALQLRAGT SSATPFPPNM
401: PMVYPPLPHG FMQQTLSCMG RTVSSPLSPP INGGYKRQEA NGWEGDLQNV IQINYGAGDV PPDSQAAATD ASLPSSNMKV EP
101: LLPPKGGNGM FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGSFSDM MNQQQPLGNP ESVGLFLQGQ CPSSEVNVVG VAHNDASSAM KETNKQNVPG
201: SGNVSEDTQS SGGNGQKGGE TSSKGFDSKK RKRNKQNAGA DQSNRSQQSE EEPDNNNGGG AEKRNDEQSP NSQGNKTNSG KQQGKQASDP KDGYIHVRAR
301: RGQATNSHSL AERVRREKIS ERMKFLQDLV PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPQ MDFNREGLLA KDALQLRAGT SSATPFPPNM
401: PMVYPPLPHG FMQQTLSCMG RTVSSPLSPP INGGYKRQEA NGWEGDLQNV IQINYGAGDV PPDSQAAATD ASLPSSNMKV EP
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.