Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45835 | Canola | nucleus | 88.42 | 92.72 |
| CDX95974 | Canola | nucleus | 82.11 | 81.42 |
| CDY33568 | Canola | nucleus | 80.84 | 79.67 |
| AT1G68920.1 | Thale cress | nucleus | 80.21 | 78.4 |
| CDY72360 | Canola | cytosol | 13.89 | 44.0 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 42.95 | 43.5 |
| PGSC0003DMT400050585 | Potato | nucleus | 44.63 | 40.77 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 23.58 | 40.73 |
| Solyc05g010610.2.1 | Tomato | nucleus | 44.21 | 40.62 |
| KRH75189 | Soybean | nucleus | 46.11 | 39.82 |
| KRH71031 | Soybean | nucleus | 45.47 | 39.2 |
| PGSC0003DMT400004830 | Potato | nucleus | 37.68 | 38.66 |
| PGSC0003DMT400022704 | Potato | nucleus | 43.16 | 38.32 |
| Solyc01g010130.2.1 | Tomato | nucleus | 41.89 | 37.06 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 32.21 | 36.96 |
| KXG35834 | Sorghum | nucleus | 33.47 | 36.38 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 32.42 | 36.32 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 32.42 | 36.32 |
| CDY25986 | Canola | plastid | 16.63 | 36.24 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 32.42 | 36.24 |
| Os09t0474100-01 | Rice | nucleus | 32.63 | 36.22 |
| Solyc04g005220.1.1 | Tomato | nucleus | 31.79 | 36.04 |
| Zm00001d020826_P001 | Maize | nucleus | 32.84 | 35.94 |
| CDY08308 | Canola | nucleus | 21.68 | 35.27 |
| CDX93427 | Canola | nucleus | 19.79 | 35.07 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 32.21 | 35.01 |
| CDY18099 | Canola | nucleus | 16.42 | 34.98 |
| CDY37979 | Canola | nucleus | 19.58 | 34.96 |
| CDY64034 | Canola | nucleus | 22.32 | 34.53 |
| CDY05670 | Canola | nucleus | 18.74 | 34.5 |
| Zm00001d005964_P002 | Maize | nucleus | 32.21 | 33.77 |
| CDY56230 | Canola | nucleus | 23.58 | 33.63 |
| CDX86296 | Canola | nucleus | 19.16 | 33.58 |
| CDY31048 | Canola | nucleus | 22.11 | 33.44 |
| CDX98249 | Canola | nucleus | 19.58 | 33.21 |
| CDY33821 | Canola | mitochondrion, plastid | 13.68 | 33.16 |
| CDX76288 | Canola | nucleus | 17.26 | 32.8 |
| CDX77488 | Canola | nucleus | 22.53 | 32.52 |
| CDX85122 | Canola | nucleus | 22.53 | 32.33 |
| CDY63738 | Canola | nucleus | 23.16 | 32.16 |
| CDY20659 | Canola | nucleus | 22.53 | 32.13 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 21.05 | 32.05 |
| CDX67710 | Canola | nucleus | 21.47 | 31.68 |
| CDY22605 | Canola | nucleus | 23.37 | 31.44 |
| CDY45806 | Canola | nucleus | 19.37 | 31.4 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 20.21 | 31.37 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 9.05 | 31.16 |
| CDX87255 | Canola | nucleus, plastid | 18.32 | 31.07 |
| CDX75440 | Canola | nucleus | 21.47 | 31.0 |
| CDX84885 | Canola | nucleus | 19.37 | 30.98 |
| CDY53497 | Canola | nucleus | 20.0 | 30.74 |
| CDY17466 | Canola | nucleus | 17.89 | 30.58 |
| CDY53834 | Canola | nucleus | 22.32 | 30.55 |
| CDX79883 | Canola | nucleus | 19.37 | 30.46 |
| CDX88966 | Canola | nucleus | 21.05 | 30.12 |
| CDY61581 | Canola | plastid | 11.58 | 30.05 |
| CDX69067 | Canola | nucleus | 21.47 | 30.0 |
| OQU81018 | Sorghum | nucleus | 22.53 | 28.53 |
| CDY06074 | Canola | nucleus | 21.26 | 28.37 |
| CDX71994 | Canola | nucleus | 21.47 | 28.25 |
| CDY51061 | Canola | nucleus | 25.68 | 28.18 |
| CDY61420 | Canola | extracellular | 8.0 | 27.94 |
| CDY57925 | Canola | nucleus | 23.16 | 27.64 |
| CDY28061 | Canola | nucleus | 25.68 | 26.93 |
| CDY35923 | Canola | nucleus, plastid | 25.26 | 26.79 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 25.89 | 26.68 |
| CDX85347 | Canola | nucleus | 26.95 | 26.07 |
| CDX86297 | Canola | nucleus | 26.74 | 25.92 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 23.58 | 25.45 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 23.37 | 25.23 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 23.37 | 25.23 |
| CDY47665 | Canola | cytosol | 13.47 | 24.9 |
| TraesCS7B01G118800.1 | Wheat | nucleus | 22.95 | 24.77 |
| Os08t0487700-00 | Rice | nucleus | 17.47 | 24.2 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078CXN8 | EnsemblPlants:CDX81575 | ProteinID:CDX81575 |
| ProteinID:CDX81575.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00135296001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEC7AB | InterPro:bHLH_dom | SEG:seg |
Description
BnaC02g18790D
Coordinates
chrLK031825:+:1686572..1689196
Molecular Weight (calculated)
51696.0 Da
IEP (calculated)
6.331
GRAVY (calculated)
-0.800
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVNEKEEFS GEKRNTSYDS ADNHPSDWRI PGSNPVSAPF GSYSTENLIT ASCSPSQMMD SFGQTLWYDP TNLQAVGYGG FSGGHPSSSS SSCFRGNMDR
101: SLEMGWSMPN LLPPKGNGLF LPNASSFLPP SMAQLPADSG FVERAARFSL FSDMVNQPLA KPESVGLFLE GQCPSTEVNV GVAHNDASTA MKGPNVRSSE
201: QASKPNVSED TQSSGQKGGE TSSKGFDSKK RKRNRQNSEA DQSHKSEEEA ENNGDKKRND EQSPNSPGNK TNSGKQQGKQ TSDPKDGYIH VRARRGQATN
301: SHSLAERVRR EKISERMKFL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPQMDFNLE ALLAKDVREL QLRGGSSSAT PFPQNMPMVY
401: PPLPHGFMQQ TLSSIGRNIS SPLSPINGGY KRQETNGWEG DLQNVIHINY GAGDVPSDPE AATASLPSSN MKVEP
101: SLEMGWSMPN LLPPKGNGLF LPNASSFLPP SMAQLPADSG FVERAARFSL FSDMVNQPLA KPESVGLFLE GQCPSTEVNV GVAHNDASTA MKGPNVRSSE
201: QASKPNVSED TQSSGQKGGE TSSKGFDSKK RKRNRQNSEA DQSHKSEEEA ENNGDKKRND EQSPNSPGNK TNSGKQQGKQ TSDPKDGYIH VRARRGQATN
301: SHSLAERVRR EKISERMKFL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPQMDFNLE ALLAKDVREL QLRGGSSSAT PFPQNMPMVY
401: PPLPHGFMQQ TLSSIGRNIS SPLSPINGGY KRQETNGWEG DLQNVIHINY GAGDVPSDPE AATASLPSSN MKVEP
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.