Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P36210_001 | Banana | nucleus | 41.55 | 62.55 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 16.18 | 55.37 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 17.63 | 44.51 |
| GSMUA_Achr10P... | Banana | nucleus | 17.63 | 39.67 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 21.5 | 39.38 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 17.39 | 39.13 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 35.99 | 39.11 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 28.74 | 38.14 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 28.02 | 37.91 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 37.92 | 37.03 |
| Bra038336.1-P | Field mustard | plastid | 32.61 | 36.99 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 37.92 | 36.94 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 37.68 | 36.79 |
| Os09t0474100-01 | Rice | nucleus | 37.68 | 36.45 |
| Zm00001d020826_P001 | Maize | nucleus | 38.16 | 36.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.88 | 36.4 |
| KXG35834 | Sorghum | nucleus | 37.92 | 35.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.77 | 35.54 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 26.81 | 35.02 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 21.74 | 34.88 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 39.37 | 34.75 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 35.75 | 34.5 |
| Zm00001d005964_P002 | Maize | nucleus | 36.96 | 33.77 |
| CDY45835 | Canola | nucleus | 36.96 | 33.77 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 36.72 | 32.97 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 34.54 | 32.8 |
| CDY33568 | Canola | nucleus | 37.92 | 32.57 |
| CDX95974 | Canola | nucleus | 37.68 | 32.57 |
| Bra004348.1-P | Field mustard | nucleus | 37.2 | 32.35 |
| CDX81575 | Canola | nucleus | 36.96 | 32.21 |
| PGSC0003DMT400050585 | Potato | nucleus | 40.34 | 32.12 |
| Solyc05g010610.2.1 | Tomato | nucleus | 40.1 | 32.11 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 27.78 | 31.77 |
| AT1G68920.1 | Thale cress | nucleus | 37.2 | 31.69 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 26.09 | 31.12 |
| KRH75189 | Soybean | nucleus | 41.3 | 31.09 |
| GSMUA_Achr10P... | Banana | nucleus | 20.77 | 31.05 |
| PGSC0003DMT400004830 | Potato | nucleus | 33.82 | 30.24 |
| Solyc01g010130.2.1 | Tomato | nucleus | 39.13 | 30.17 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 20.53 | 30.14 |
| KRH71031 | Soybean | nucleus | 40.1 | 30.13 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 22.95 | 30.06 |
| OQU81018 | Sorghum | nucleus | 26.81 | 29.6 |
| PGSC0003DMT400022704 | Potato | nucleus | 37.92 | 29.35 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 29.71 | 29.15 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 21.98 | 28.53 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 24.88 | 28.22 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 21.98 | 27.08 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 25.12 | 26.87 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 33.82 | 26.82 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 18.6 | 26.55 |
| Os08t0487700-00 | Rice | nucleus | 21.98 | 26.53 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 22.95 | 25.96 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 30.92 | 25.45 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 29.23 | 25.31 |
| GSMUA_Achr10P... | Banana | nucleus | 23.91 | 24.63 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 21.5 | 24.25 |
| Solyc04g005220.1.1 | Tomato | nucleus | 24.15 | 23.87 |
| GSMUA_Achr10P... | Banana | nucleus | 24.15 | 23.64 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 24.88 | 23.3 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 21.01 | 22.48 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 26.33 | 22.34 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 24.15 | 21.88 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 29.95 | 21.75 |
| GSMUA_Achr10P... | Banana | mitochondrion | 30.19 | 19.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P24490_001 | EnsemblPlants:GSMUA_Achr8T24490_001 | EnsemblPlantsGene:GSMUA_Achr8G24490_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000295FDE8 | UniProt:M0TTA2 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Putative Transcription factor bHLH49 [Source:GMGC_GENE;Acc:GSMUA_Achr8G24490_001]
Coordinates
chr8:-:28682345..28685195
Molecular Weight (calculated)
44957.3 Da
IEP (calculated)
6.348
GRAVY (calculated)
-0.629
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMNERDECS SEKNEHHLTY SNAGFSSGWQ FRNPSVGIVP GDQRGSMEDS FNPSLWKLCE SDMPAIAKPV PATSRFDDGW TPSDSSSRGG TFLPSGPPIL
101: TPTLSHFPAD SAFIKRAARF SCFSAASLGS MATPFGASHL AGAQIHNIDI NMAKDASLHD VEPGEAAVPS GVGGGHENAD SSSKDLAAKK RRRSSEELEA
201: ERGDPQMAAE AKTESVDTDH KAEQSSSTAK PNGKHDKDAS EAPKEDYIHV RARRGQATNS HSLAERVRRE KISQRMKLLQ ELVPGCSKVT GKAVMLDEII
301: NYVQSLQQQV EFLSMKLAAV NPRLDFNIES LLSKDFLQSH GGTSSAIGFS PDAVHPQMHL SQQGLVQAEI SGNLNHPNAF RRAVNSMPNA WDEQLQNVMQ
401: MAAFSSNSQQ PRTQ
101: TPTLSHFPAD SAFIKRAARF SCFSAASLGS MATPFGASHL AGAQIHNIDI NMAKDASLHD VEPGEAAVPS GVGGGHENAD SSSKDLAAKK RRRSSEELEA
201: ERGDPQMAAE AKTESVDTDH KAEQSSSTAK PNGKHDKDAS EAPKEDYIHV RARRGQATNS HSLAERVRRE KISQRMKLLQ ELVPGCSKVT GKAVMLDEII
301: NYVQSLQQQV EFLSMKLAAV NPRLDFNIES LLSKDFLQSH GGTSSAIGFS PDAVHPQMHL SQQGLVQAEI SGNLNHPNAF RRAVNSMPNA WDEQLQNVMQ
401: MAAFSSNSQQ PRTQ
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.