Factsheet for GSMUA_AchrUn_randomP23560_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P09170_001	Banana	nucleus	25.21	50.41
GSMUA_Achr6P16480_001	Banana	nucleus	29.34	43.29
GSMUA_Achr5P24960_001	Banana	nucleus	28.1	36.96
GSMUA_Achr10P...	Banana	nucleus	27.69	36.41
VIT_01s0244g00010.t01	Wine grape	nucleus	33.88	30.37
GSMUA_Achr1P27010_001	Banana	nucleus	28.1	30.09
GSMUA_Achr9P11020_001	Banana	nucleus	31.82	29.84
GSMUA_Achr9P01040_001	Banana	nucleus	34.3	29.43
GSMUA_AchrUn_...	Banana	nucleus	32.64	27.92
GSMUA_Achr10P...	Banana	nucleus	31.82	27.8
GSMUA_Achr6P36210_001	Banana	nucleus	31.41	27.64
GSMUA_Achr9P28060_001	Banana	nucleus	33.88	26.8
GSMUA_Achr9P18510_001	Banana	nucleus	32.23	25.0
GSMUA_Achr2P09660_001	Banana	nucleus	32.64	24.92
GSMUA_Achr9P07330_001	Banana	nucleus	35.95	24.03
GSMUA_Achr6P09050_001	Banana	nucleus	30.58	23.42
GSMUA_Achr7P01750_001	Banana	nucleus	30.99	22.32
GSMUA_Achr9P22300_001	Banana	nucleus	26.03	21.72
GSMUA_Achr9P09770_001	Banana	nucleus	28.51	21.63
GSMUA_Achr1P09570_001	Banana	nucleus	30.99	21.61
GSMUA_Achr3P12130_001	Banana	nucleus	33.88	21.52
GSMUA_Achr1P19610_001	Banana	nucleus	32.23	21.37
GSMUA_Achr4P17570_001	Banana	golgi, vacuole	32.23	21.25
GSMUA_Achr4P19330_001	Banana	nucleus	33.47	20.93
GSMUA_Achr8P24490_001	Banana	nucleus	35.54	20.77
GSMUA_Achr7P06330_001	Banana	nucleus	31.41	20.77
GSMUA_Achr3P02490_001	Banana	nucleus	35.95	20.62
GSMUA_Achr10P...	Banana	nucleus	33.47	20.15
GSMUA_Achr2P21460_001	Banana	nucleus	31.41	19.64
GSMUA_Achr2P06090_001	Banana	nucleus	37.19	18.83
GSMUA_Achr3P13490_001	Banana	nucleus	33.88	18.81
GSMUA_Achr6P27780_001	Banana	nucleus	40.5	18.77
GSMUA_Achr1P19120_001	Banana	nucleus	33.06	18.65
GSMUA_Achr3P10600_001	Banana	nucleus	35.12	18.44
GSMUA_Achr7P22770_001	Banana	nucleus	33.47	18.33
GSMUA_Achr2P21280_001	Banana	nucleus	38.02	18.29
GSMUA_Achr10P...	Banana	nucleus	31.82	18.2
GSMUA_Achr4P16120_001	Banana	nucleus	31.41	16.63
GSMUA_Achr7P02770_001	Banana	nucleus	32.23	15.98
GSMUA_Achr3P17290_001	Banana	plastid	37.6	15.96
GSMUA_Achr10P...	Banana	mitochondrion	35.95	13.22

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	EnsemblPlantsGene:GSMUA_AchrUn_randomG23560_001	EnsemblPlants:GSMUA_AchrUn_randomP23560_001	EnsemblPlants:GSMUA_AchrUn_randomT23560_001	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:M0UBR4	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF184	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000295F420	InterPro:bHLH_dom	SEG:seg

Description

BEE 1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23560_001]

Coordinates

chrchrUn_random:+:115484427..115485509

Molecular Weight (calculated)

27391.7 Da

IEP (calculated)

10.314

GRAVY (calculated)

-0.812

Length

242 amino acids

Sequence
(BLAST)

001: MNSSSVMVDP RGGRGVAPTP RSSMEKKRKK RDLTTALRTS TVLDCSSNVS CHQGAERNVR KRNKHAEEKK KKKKKDDEAD NGEGRGYIHV RARRGEATDS
101: HSRAERVRRE RIRERMDLLR GLVPGCDKNT GKAVMLDEII NYVQFLQNQV EFLSMKLASM NPIFYDLERF ESSALQTSPF HQAAPEGASR SYTMKEASTP
201: LLLHDQGPIS LPQEHGSVVV KVADRRQELL HQVVFNNVCS FQ

Best Arabidopsis Sequence Match ( AT5G50915.1 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.