Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 65.61 | 68.56 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 15.16 | 55.37 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 16.74 | 45.12 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 16.06 | 38.59 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 22.17 | 37.98 |
| GSMUA_Achr10P... | Banana | nucleus | 15.61 | 37.5 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 18.1 | 35.4 |
| Os04t0350700-01 | Rice | nucleus | 21.04 | 35.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.33 | 33.47 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 19.68 | 31.64 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 32.13 | 31.07 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 23.53 | 30.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.68 | 30.74 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 33.26 | 30.12 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 21.27 | 29.75 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 24.66 | 29.7 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 23.98 | 29.28 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 18.55 | 29.08 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 26.92 | 28.2 |
| Os11t0442500-00 | Rice | nucleus | 23.53 | 27.73 |
| Zm00001d042373_P002 | Maize | nucleus | 28.73 | 27.43 |
| Zm00001d006065_P002 | Maize | nucleus | 21.49 | 27.14 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 19.46 | 27.13 |
| Zm00001d021019_P001 | Maize | nucleus | 21.49 | 26.84 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 18.55 | 26.8 |
| TraesCS3A01G421400.1 | Wheat | nucleus | 26.47 | 26.77 |
| OQU89735 | Sorghum | nucleus | 21.27 | 26.7 |
| Os09t0501600-01 | Rice | nucleus | 21.95 | 26.5 |
| GSMUA_Achr10P... | Banana | nucleus | 16.52 | 26.35 |
| Zm00001d031561_P002 | Maize | nucleus | 23.3 | 26.34 |
| Zm00001d012067_P003 | Maize | nucleus | 28.51 | 26.25 |
| TraesCS7D01G257000.2 | Wheat | nucleus | 22.62 | 25.84 |
| Os01t0915600-01 | Rice | nucleus | 28.05 | 25.78 |
| TraesCS7B01G152800.1 | Wheat | nucleus | 22.4 | 25.71 |
| EES04098 | Sorghum | nucleus | 28.05 | 25.62 |
| TraesCS5B01G278600.1 | Wheat | nucleus | 21.49 | 25.47 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 19.91 | 25.36 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 17.87 | 25.32 |
| Solyc09g057710.2.1 | Tomato | nucleus | 27.15 | 25.32 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 29.86 | 25.29 |
| EES15330 | Sorghum | nucleus | 22.62 | 25.19 |
| TraesCS7A01G256200.3 | Wheat | nucleus | 22.62 | 25.19 |
| TraesCS3B01G457400.1 | Wheat | nucleus | 26.92 | 25.11 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 27.15 | 25.1 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 21.27 | 25.07 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 27.15 | 25.05 |
| Os08t0524800-01 | Rice | nucleus | 22.85 | 24.94 |
| HORVU7Hr1G052870.23 | Barley | nucleus | 22.17 | 24.94 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 23.3 | 24.88 |
| TraesCS5A01G279200.2 | Wheat | nucleus | 21.72 | 24.87 |
| PGSC0003DMT400053639 | Potato | nucleus | 27.6 | 24.8 |
| TraesCS2D01G274600.1 | Wheat | nucleus | 22.85 | 24.63 |
| TraesCS2A01G275600.1 | Wheat | nucleus | 22.4 | 24.38 |
| OQU83382 | Sorghum | nucleus | 23.53 | 24.19 |
| TraesCS2B01G293300.1 | Wheat | nucleus | 22.85 | 24.11 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 27.15 | 23.86 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 20.36 | 23.62 |
| GSMUA_Achr10P... | Banana | nucleus | 21.27 | 23.38 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 21.72 | 22.54 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 18.55 | 22.47 |
| Zm00001d049158_P001 | Maize | nucleus | 22.4 | 22.3 |
| Zm00001d007311_P001 | Maize | nucleus | 23.08 | 22.13 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 18.1 | 21.86 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 15.61 | 21.63 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 18.78 | 21.45 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 20.59 | 21.21 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 27.15 | 21.05 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 13.8 | 21.03 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 18.1 | 20.67 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 21.04 | 20.17 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 19.46 | 19.72 |
| HORVU3Hr1G093310.2 | Barley | nucleus, plasma membrane, plastid | 27.6 | 19.18 |
| GSMUA_Achr10P... | Banana | mitochondrion | 28.28 | 19.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P22770_001 | EnsemblPlants:GSMUA_Achr7T22770_001 | EnsemblPlantsGene:GSMUA_Achr7G22770_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000296D133 | UniProt:M0TJW3 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Putative Transcription factor bHLH62 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22770_001]
Coordinates
chr7:-:25178422..25180634
Molecular Weight (calculated)
48237.8 Da
IEP (calculated)
6.869
GRAVY (calculated)
-0.648
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRGPPDQLP SCLLDLNWEQ TMESTGHFEA ALSSVDGMAV HKLVGRLPHS HHVGVRLNSP PRPNLSMAGH FLQPQQAMGG LPPSGTPMPL THLDQFSADL
101: GRFSSFGGRN YGHLATQFGF LDTEKLSRTA SSQSLQTSRL PIGREIPAQN RLQLDVNNGE SMNAREESSV SDPASREVSL GAPAWSSEKK RKAPPKGKAK
201: EVGLANSAMD PPKVAEEDAK RCRSNEKNGN EDDALKPKVE QNDGSSGNGN GGQKQGRNAA AKSPEPPKDF IHVRARRGQA TDSHSLAERV RREKISQRMK
301: LLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPHLDID SLANLLPKDM HQTCVYAPPP CVDHSQQGAS LHCVLPDGME TQSAVNLLDS
401: TFHQGLSTHQ PFLDGFESAS SQLGTFWEDD LQNITHMDIG QN
101: GRFSSFGGRN YGHLATQFGF LDTEKLSRTA SSQSLQTSRL PIGREIPAQN RLQLDVNNGE SMNAREESSV SDPASREVSL GAPAWSSEKK RKAPPKGKAK
201: EVGLANSAMD PPKVAEEDAK RCRSNEKNGN EDDALKPKVE QNDGSSGNGN GGQKQGRNAA AKSPEPPKDF IHVRARRGQA TDSHSLAERV RREKISQRMK
301: LLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPHLDID SLANLLPKDM HQTCVYAPPP CVDHSQQGAS LHCVLPDGME TQSAVNLLDS
401: TFHQGLSTHQ PFLDGFESAS SQLGTFWEDD LQNITHMDIG QN
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.