Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89735 | Sorghum | nucleus | 89.83 | 90.34 |
| Zm00001d006065_P002 | Maize | nucleus | 85.59 | 86.57 |
| Os09t0501600-01 | Rice | nucleus | 69.77 | 67.49 |
| TraesCS5B01G278600.1 | Wheat | nucleus | 63.84 | 60.59 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 63.84 | 60.27 |
| TraesCS5A01G279200.2 | Wheat | nucleus | 64.12 | 58.81 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 63.28 | 52.58 |
| Zm00001d031561_P002 | Maize | nucleus | 56.5 | 51.15 |
| Zm00001d034503_P002 | Maize | nucleus | 25.42 | 35.29 |
| Zm00001d007768_P001 | Maize | nucleus | 24.29 | 34.26 |
| Zm00001d033870_P001 | Maize | nucleus | 25.99 | 28.48 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 22.6 | 27.87 |
| Zm00001d031665_P001 | Maize | mitochondrion | 24.29 | 27.3 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 24.29 | 26.79 |
| Zm00001d051569_P001 | Maize | nucleus | 25.42 | 26.32 |
| Zm00001d042373_P002 | Maize | nucleus | 34.18 | 26.13 |
| Zm00001d020826_P001 | Maize | nucleus | 31.92 | 26.04 |
| Zm00001d049870_P001 | Maize | nucleus | 23.45 | 26.02 |
| Zm00001d012067_P003 | Maize | nucleus | 34.75 | 25.62 |
| Solyc09g057710.2.1 | Tomato | nucleus | 34.18 | 25.53 |
| Zm00001d017778_P001 | Maize | nucleus | 26.84 | 24.74 |
| PGSC0003DMT400053639 | Potato | nucleus | 33.9 | 24.39 |
| Zm00001d005964_P002 | Maize | nucleus | 31.07 | 24.28 |
| Zm00001d013357_P001 | Maize | nucleus | 23.16 | 23.56 |
| Zm00001d049158_P001 | Maize | nucleus | 28.25 | 22.52 |
| GSMUA_Achr10P... | Banana | nucleus | 26.27 | 21.99 |
| Zm00001d046759_P001 | Maize | plastid | 22.03 | 21.91 |
| Zm00001d036807_P001 | Maize | nucleus | 22.6 | 21.62 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 26.84 | 21.49 |
| Zm00001d007311_P001 | Maize | nucleus | 27.68 | 21.26 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 25.14 | 19.47 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 26.84 | 19.47 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1D6I7X9 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM56151.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF169 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0001FBD998 | EnsemblPlantsGene:Zm00001d021019 | EnsemblPlants:Zm00001d021019_P001 | EnsemblPlants:Zm00001d021019_T001 | InterPro:bHLH_dom | SEG:seg |
Description
bHLH-transcription factor 136Transcription factor bHLH62
Coordinates
chr7:-:140533153..140535630
Molecular Weight (calculated)
37462.1 Da
IEP (calculated)
5.459
GRAVY (calculated)
-0.396
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDYVASLL MGMGSSAPAL DFAALDAGFL ETLCGGGGGL FGVSGVAAGA GCGGVSPEGS SVSDPAWARA RGDDNVRKRK APPTGSAGGK EACPGKAAEA
101: KGPDGKRCRV GGSDSPVKPK VEEVAASDAS VELKAQKKGK GKTAKPAVEP PKDYVHVRAR RGQATDSHSL AERVRREKIS QRMKFLQDLV PGCNKVVGKA
201: LMLDEIINYV QSLQQQVEFL SMKLATVNPQ LDFSNLSTLL HKDMYQPCGP SANSVFPLES DGAAFPFCDQ ADLFHSFGSG SAAMEDQCSL SLLDTALPHA
301: ANPQFAFQKQ QRDFWEDGLQ NALPTGSEQR QEEDGLLVPN FDGQLHADQT KVEF
101: KGPDGKRCRV GGSDSPVKPK VEEVAASDAS VELKAQKKGK GKTAKPAVEP PKDYVHVRAR RGQATDSHSL AERVRREKIS QRMKFLQDLV PGCNKVVGKA
201: LMLDEIINYV QSLQQQVEFL SMKLATVNPQ LDFSNLSTLL HKDMYQPCGP SANSVFPLES DGAAFPFCDQ ADLFHSFGSG SAAMEDQCSL SLLDTALPHA
301: ANPQFAFQKQ QRDFWEDGLQ NALPTGSEQR QEEDGLLVPN FDGQLHADQT KVEF
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.